Gene detail information of Glyur000797s00025495 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G13170.1 | 2.00E-82 | senescence-associated gene 29 |
| NR | NP_001239695.1 | 2.95E-151 | uncharacterized protein LOC100777741 [Glycine max] |
| Swissprot | tr|P93332|NOD3_MEDTR | 7.00E-146 | Bidirectional sugar transporter N3 |
| trEMBL | tr|C6TNP9|C6TNP9_SOYBN | 1.00E-151 | Sugar transporter SWEET {ECO:0000256|RuleBase:RU910715} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00797 | 44278 | 46327 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000797s00025495.1 | PF03083.11 | MtN3_slv | 10 | 96 | 9.70E-32 |
| Glyur000797s00025495.1 | PF03083.11 | MtN3_slv | 131 | 216 | 4.50E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.858 |
| SRR1783600 | control | 0.852 |
| SRR1783602 | moderate drought stress | 0.343 |
| SRR1811619 | moderate drought stress | 0.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.125 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.124 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.128 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.128 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 39.737 |
| SRR2868004 | Drought Stress (root) | 7.526 |
| SRR2967015 | Control (root) | 3.662 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.355 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.010 |
| SRR8749028 | MeJA induced 9h | 0.051 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.002 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.099 |
| SRR8400027 | Control - Root | 1.873 |