Gene detail information of Glyur000795s00031108 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G68910.3 | 8.00E-119 | WPP domain-interacting protein 2 |
| NR | KHN15650.1 | 0 | WPP domain-interacting tail-anchored protein 2 [Glycine soja] |
| Swissprot | tr|A8MQR0|WIT2_ARATH | 5.00E-148 | WPP domain-interacting tail-anchored protein 2 |
| trEMBL | tr|I1J679|I1J679_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G09420.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00795 | 52052 | 57058 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.457 |
| SRR1783600 | control | 4.442 |
| SRR1783602 | moderate drought stress | 4.957 |
| SRR1811619 | moderate drought stress | 4.797 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.056 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.978 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.913 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.602 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.848 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.923 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.109 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.361 |
| SRR2868004 | Drought Stress (root) | 14.469 |
| SRR2967015 | Control (root) | 15.628 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.627 |
| SRR9715740 | Leaf | 9.104 |
| SRR9715741 | Leaf | 11.100 |
| SRR9715739 | Root | 0.227 |
| SRR9715742 | Root | 2.056 |
| SRR9715743 | Root | 1.481 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.068 |
| SRR8749028 | MeJA induced 9h | 8.583 |
| SRR8749029 | MeJA induced 9h | 6.475 |
| SRR8749030 | Uninduced | 4.874 |
| SRR8749031 | Uninduced | 5.817 |
| SRR8749032 | Uninduced | 2.780 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.914 |
| SRR8400027 | Control - Root | 14.046 |