Gene detail information of Glyur000795s00031105 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G68920.3 | 6.00E-83 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_006573185.1 | 0 | PREDICTED: transcription factor bHLH49-like isoform X3 [Glycine max] |
| Swissprot | tr|Q9CAA9|BH049_ARATH | 3.00E-104 | Transcription factor bHLH49 |
| trEMBL | tr|K7K2A6|K7K2A6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G09400.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00795 | 11375 | 16081 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000795s00031105.1 | PF00010.21 | HLH | 372 | 420 | 2.10E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.156 |
| SRR1783600 | control | 10.267 |
| SRR1783602 | moderate drought stress | 18.909 |
| SRR1811619 | moderate drought stress | 18.779 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.777 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.171 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 27.028 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 26.218 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.710 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.778 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.391 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.936 |
| SRR2868004 | Drought Stress (root) | 31.789 |
| SRR2967015 | Control (root) | 41.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.761 |
| SRR9715740 | Leaf | 11.048 |
| SRR9715741 | Leaf | 12.247 |
| SRR9715739 | Root | 3.650 |
| SRR9715742 | Root | 17.148 |
| SRR9715743 | Root | 13.591 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.789 |
| SRR8749028 | MeJA induced 9h | 9.103 |
| SRR8749029 | MeJA induced 9h | 5.656 |
| SRR8749030 | Uninduced | 9.159 |
| SRR8749031 | Uninduced | 4.620 |
| SRR8749032 | Uninduced | 3.630 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.750 |
| SRR8400027 | Control - Root | 24.422 |