Gene detail

Gene detail information of Glyur000793s00026498

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G52950.1	1.00E-116
NR	XP_004513261.1	0	PREDICTED: uncharacterized protein LOC101488263 [Cicer arietinum]
trEMBL	tr\|G7LBX4\|G7LBX4_MEDTR	0	Uncharacterized protein {ECO:0000313\|EMBL:AET02917.2}

Sequence

Transcript Sequence

>Glyur000793s00026498.1
ATGGCTGCTGCAGACTCANATCCAATGACGTGTTACTCCCACACCCAACGCATCGTTCTCCTCATCGATCTCGACCCACTCCTCCACAACAACAACAACAGCAATTACACGAAGAACATCCTCTCCTCCGCCAAAACCCTACTCTCTTTCCCTCCCTTCTCTTCCTCTTCTACCCTCTTCGCCTTCAAGCTCTTCTTCTCCTCCCTCTCCCCTCTCCTCTCCTCCTCCAAACTCCACCCTTTCCTCCCCAATCCCTCTTCCCTCTCCTTCGACCACCCTTCCTCCACCCTCATTACCCTCTCCCGCACCCTCTCCTTTCTCCCTCAATTCCCTAACCCTAACCCTCTCCCCAAAGCCTCTCACCTCGTATCTTCCCTCACACAGATCCTCCACGACTACCCCTGGGACCCCGATCCCGATTCCATTCCCGTTCCCCCCAATTTGCTCCTCTTGTTCTCCCCCTTCTCCCACNCCTTCCACTCCCTCGCCGCCTTCTTCGACGCTGACGCCGAGTCGTTTCGAACCGAGGGCTACTTCTCCGACACGTTCTCCGCGTTTTTCGGGGGCGTGAGCCGCGCGTTTGGCTCCAGGGGCATTCACTGCACCTGGGTCGGTGTTGGTGTCAATGGCAATGAGAGNGGAGAGAGTGGGATGATACGGGGGTTGTTTGATACTGCTGCTGCGAAATTGGGTTGGGGGTTTTGCTCTCTCGATTCCATTTTGCTTGGTTCGGCTCTTGTTCCTTTTGGGTTGATATATCCCAAAATTGGGATCTCATGGTCTTCTGTTAATTGTTCTTCTAGGGAAGTTCAGGTGCAGGCGCAGTTGAGTCTTTCGATCTTAGACGTTAATGGGAGCCCCATTGAGTACAACTGCTGCGATCTCGAGCTGATGGATTTGAGAGTTTTAGGAGGTAGCGGTGAGTGGTGGTNGACGAATTCNAGAGCTGGTGGNGGTGGAAGTGAAAGGAAGGAGAGGTTGTGGAGTCTGTGTTCGGATGGAATGGTGAAACTGCAAGTCAAGGTTGTGCAGGGGTGTGATGCTTTTGTTAAATTGAGGGACTGCCTCTCTGATTCGGTTCTCGTGCGCGAGGTGGTTTCNGGGGAATCTAAGAAGAAACACAAGGGGAGTTCGGATGAGTTTTTTGCTGATAGGGTCCTTGAACTGGTCGCAACTGAATTTGGCCACCCGTGGAGGCGGAAATCGGTGCCTGTTTGGGAGATATTGCTNAGTTTTCTTTATAAAGAAGGTTGCTGGGCTTTGGTGTCTGTTACCAATGGCAAAGGTGGTTCATGTGTTGGTATTCTTAGGCCTTTTACCGTTTCCTCTGCTCTCTTGTCTGTCTTGGAGGACCCACAATTGGCTGCTGATTTTGGTGCAGCAAATGTGGATCATCGTGTTAGGACAGGCGAAGATCAGATTCACGAATCGGATCTCAAATTTAACAAGAACAAGGATTTGTACGATTCTCAAGTCAAGAGTGCTGTGGGAGTTATTAAGGGTANGAAGGAAAAGAAAACGATGGATTTGAATGCACTTCGAAACCTCACGTGGAGCTCCTTTTGTGATTTGGTACATGATCAATTTGAGATGGATCTCCATGAGGTTTATTATGCAATGGAGTGTAACAAGTCAAAAAAGATGAANTTTTTGAAATGCTGGATGAAACAGGTGAAGAAATCTGGCTGCTGTGATCTAACTTNGTCGGAAAAGCCCAAGCCAAATCAGATAACCGCGGAAGAGATTGGAAGTAAATTGACCGAGTTACCTCAAAATGGTGAACAGCCAAACTCATCGTCGGTATCGGCTGGAGTTAATGCTGAGGCTTCTAGATTACAGGATGAGGACGCGCTTGATTTTAGGTCAGAAANGTCTGAAGCATTTTTTGAAAATCTTTCCAACAAGATCCATCAGGGAATTGAATCTGAAGTCATAGACCTCAGGGCTTTGGCAGAGCGGCTTGTGAATTCATCTATATACTGGATACGCCAGAAGGTTGATGGGGAAACAATTTCTCAGAGCCATTCTCCTTTAAAAGGCAATAATGTTTGCGATAGCATGGTTGCATCTGAACTGATAAAACTTNTACTGAGGGAGCCCAAGGAGATAGCTGCAAAGCACAAAAGCAGAAATTCATTCTCTCAGGCATCTGATATAGGACCTACTAAAATGATCACAGAACATGTAGTTAGAGAACATGAACTGCAGATTTTATTTCGGATGGAAATTTTGCAATCAGAGGTTGGAAGTGGAATTGAANATTCCAGCAAACAGAAGTTTGTCAAACAAATATGCCTGCTTTTAGAGAACATTCAGTGCCACATGGACGGGGGATTCTTTGGTGATTGGAACCTTGAAAATTATGTGGCAAAGATCATAAAAAGCAGGTGCAAGTATTCTCACACTCTTGAAGACGTGGTCCATAAAATCTACAACAAAATGGACCTGGTGCTGTTTGGAGATGAGGATGAAGCCCCAGACTATTTACTTAACAGCGAGGACAGCAACAAGTCCTTGAANCCAAAAGTTTACAGAGATGAGATGGGTGAAAACGATGTCAGTAATGAACCTTTTTCAGCAGAAAATGAGCCCTTTCATTTGCAGAAGAATGACAGTGGAATATTCCAAAGGATTATAGAAGGGGATCATGATAGAAAACTAGTCGAAGCTAAGGAGAGGAGAGAGAGGGCACGCAGATTTTCATCTTTCACAAGTTGGATGCCTGATTTACACAGNGTTTGGGCCCCAAAACAGAAGGGTGTGAAACCCAAGACAGATCCCCTTCGAAAGATTCCAAAAAGGAAGGAGCGACAAAGAGCAAGCTATGACACGGTATGTGAGACGCCAATGACAAGAAACAAGCGGTCAAGCCCATGGACAGGAGGATCAGATGATGACAGTCGCCTGGNTGATGGTAGTCAAACATGTGGTTCTGTTTCTAAGGCATTGTTTCAG

Protein Sequence

>Glyur000793s00026498.1
MAAADSXPMTCYSHTQRIVLLIDLDPLLHNNNNSNYTKNILSSAKTLLSFPPFSSSSTLFAFKLFFSSLSPLLSSSKLHPFLPNPSSLSFDHPSSTLITLSRTLSFLPQFPNPNPLPKASHLVSSLTQILHDYPWDPDPDSIPVPPNLLLLFSPFSHXFHSLAAFFDADAESFRTEGYFSDTFSAFFGGVSRAFGSRGIHCTWVGVGVNGNEXGESGMIRGLFDTAAAKLGWGFCSLDSILLGSALVPFGLIYPKIGISWSSVNCSSREVQVQAQLSLSILDVNGSPIEYNCCDLELMDLRVLGGSGEWWXTNSRAGGGGSERKERLWSLCSDGMVKLQVKVVQGCDAFVKLRDCLSDSVLVREVVSGESKKKHKGSSDEFFADRVLELVATEFGHPWRRKSVPVWEILLSFLYKEGCWALVSVTNGKGGSCVGILRPFTVSSALLSVLEDPQLAADFGAANVDHRVRTGEDQIHESDLKFNKNKDLYDSQVKSAVGVIKGXKEKKTMDLNALRNLTWSSFCDLVHDQFEMDLHEVYYAMECNKSKKMXFLKCWMKQVKKSGCCDLTXSEKPKPNQITAEEIGSKLTELPQNGEQPNSSSVSAGVNAEASRLQDEDALDFRSEXSEAFFENLSNKIHQGIESEVIDLRALAERLVNSSIYWIRQKVDGETISQSHSPLKGNNVCDSMVASELIKLXLREPKEIAAKHKSRNSFSQASDIGPTKMITEHVVREHELQILFRMEILQSEVGSGIEXSSKQKFVKQICLLLENIQCHMDGGFFGDWNLENYVAKIIKSRCKYSHTLEDVVHKIYNKMDLVLFGDEDEAPDYLLNSEDSNKSLXPKVYRDEMGENDVSNEPFSAENEPFHLQKNDSGIFQRIIEGDHDRKLVEAKERRERARRFSSFTSWMPDLHXVWAPKQKGVKPKTDPLRKIPKRKERQRASYDTVCETPMTRNKRSSPWTGGSDDDSRLXDGSQTCGSVSKALFQ

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00793	45207	48618	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--	--

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.631
SRR1783600	control	2.650
SRR1783602	moderate drought stress	1.576
SRR1811619	moderate drought stress	1.627

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.398
DRR006520	Root Summer glycyrrhizin high producing strain	2.139
DRR006521	Root Winter glycyrrhizin high producing strain	1.674
DRR006522	Root Winter glycyrrhizin high producing strain	1.587
DRR006523	Root Summer glycyrrhizin low producing strain	1.523
DRR006524	Root Summer glycyrrhizin low producing strain	1.411
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.348
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.410

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.748
SRR2868004	Drought Stress (root)	3.115
SRR2967015	Control (root)	2.951

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.723
SRR9715740	Leaf	0.102
SRR9715741	Leaf	0.461
SRR9715739	Root	0.365
SRR9715742	Root	0.318
SRR9715743	Root	0.354

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.329
SRR8749028	MeJA induced 9h	5.311
SRR8749029	MeJA induced 9h	2.447
SRR8749030	Uninduced	1.539
SRR8749031	Uninduced	1.262
SRR8749032	Uninduced	1.012

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.997
SRR8400027	Control - Root	3.197