Gene detail information of Glyur000792s00027617 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44850.1 | 2.00E-47 | |
| NR | KHN10327.1 | 3.41E-107 | hypothetical protein glysoja_040555 [Glycine soja] |
| trEMBL | tr|K7M0I2|K7M0I2_SOYBN | 9.00E-108 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G25700.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00792 | 115933 | 116523 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000792s00027617.1 | PF10561.4 | UPF0565 | 20 | 161 | 2.10E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.990 |
| SRR1783600 | control | 22.410 |
| SRR1783602 | moderate drought stress | 22.685 |
| SRR1811619 | moderate drought stress | 29.609 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.496 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.213 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 61.180 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 58.748 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 37.928 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.021 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 29.998 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 28.527 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.631 |
| SRR2868004 | Drought Stress (root) | 26.239 |
| SRR2967015 | Control (root) | 35.273 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 40.604 |
| SRR9715740 | Leaf | 40.233 |
| SRR9715741 | Leaf | 30.803 |
| SRR9715739 | Root | 1.970 |
| SRR9715742 | Root | 11.660 |
| SRR9715743 | Root | 6.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 40.669 |
| SRR8749028 | MeJA induced 9h | 41.343 |
| SRR8749029 | MeJA induced 9h | 43.517 |
| SRR8749030 | Uninduced | 55.833 |
| SRR8749031 | Uninduced | 44.238 |
| SRR8749032 | Uninduced | 50.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.982 |
| SRR8400027 | Control - Root | 25.661 |