Gene detail information of Glyur000791s00032231 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G72160.1 | 5.00E-13 | Sec14p-like phosphatidylinositol transfer family protein |
| NR | XP_003525154.1 | 1.86E-18 | PREDICTED: patellin-3-like [Glycine max] |
| Swissprot | tr|Q56Z59|PATL3_ARATH | 1.00E-14 | Patellin-3 |
| trEMBL | tr|I1K553|I1K553_SOYBN | 7.00E-19 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G33190.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00791 | 85875 | 87945 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.550 |
| SRR1783600 | control | 9.463 |
| SRR1783602 | moderate drought stress | 22.455 |
| SRR1811619 | moderate drought stress | 22.673 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.798 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.874 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.302 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.704 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.250 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.872 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.334 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.140 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.288 |
| SRR2868004 | Drought Stress (root) | 14.307 |
| SRR2967015 | Control (root) | 14.223 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.396 |
| SRR9715740 | Leaf | 1.949 |
| SRR9715741 | Leaf | 5.607 |
| SRR9715739 | Root | 0.707 |
| SRR9715742 | Root | 3.255 |
| SRR9715743 | Root | 1.846 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.303 |
| SRR8749028 | MeJA induced 9h | 28.598 |
| SRR8749029 | MeJA induced 9h | 26.946 |
| SRR8749030 | Uninduced | 82.220 |
| SRR8749031 | Uninduced | 137.422 |
| SRR8749032 | Uninduced | 82.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.134 |
| SRR8400027 | Control - Root | 13.535 |