Gene detail information of Glyur000790s00021804 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G14820.3 | 1.00E-92 | Sec14p-like phosphatidylinositol transfer family protein |
| NR | XP_003518618.1 | 2.16E-158 | PREDICTED: phosphatidylinositol transfer protein CSR1-like [Glycine max] |
| Swissprot | tr|Q9SCU1|PATL6_ARATH | 1.00E-08 | Patellin-6 |
| trEMBL | tr|I1JDI4|I1JDI4_SOYBN | 8.00E-159 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G09460.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00790 | 72057 | 76417 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000790s00021804.1 | PF00650.15 | CRAL_TRIO | 77 | 226 | 2.00E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.539 |
| SRR1783600 | control | 15.640 |
| SRR1783602 | moderate drought stress | 11.272 |
| SRR1811619 | moderate drought stress | 11.427 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.260 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.356 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.700 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.253 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.288 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.712 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 43.597 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 43.342 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.374 |
| SRR2868004 | Drought Stress (root) | 24.417 |
| SRR2967015 | Control (root) | 18.163 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 86.484 |
| SRR9715740 | Leaf | 88.072 |
| SRR9715741 | Leaf | 93.895 |
| SRR9715739 | Root | 6.724 |
| SRR9715742 | Root | 14.811 |
| SRR9715743 | Root | 13.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.572 |
| SRR8749028 | MeJA induced 9h | 16.896 |
| SRR8749029 | MeJA induced 9h | 16.082 |
| SRR8749030 | Uninduced | 28.761 |
| SRR8749031 | Uninduced | 8.371 |
| SRR8749032 | Uninduced | 7.958 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.165 |
| SRR8400027 | Control - Root | 17.395 |