Gene detail information of Glyur000789s00034747 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007159292.1 | 1.63E-15 | hypothetical protein PHAVU_002G2258001g, partial [Phaseolus vulgaris] |
| trEMBL | tr|V7CQT5|V7CQT5_PHAVU | 6.00E-16 | Uncharacterized protein {ECO:0000313|EMBL:ESW31286.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00789 | 82410 | 85434 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.793 |
| SRR1783600 | control | 9.203 |
| SRR1783602 | moderate drought stress | 3.011 |
| SRR1811619 | moderate drought stress | 3.373 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.191 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.699 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.859 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.658 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.044 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.001 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.921 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.308 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.957 |
| SRR2868004 | Drought Stress (root) | 1.319 |
| SRR2967015 | Control (root) | 0.779 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.546 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 2.844 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.165 |
| SRR9715743 | Root | 0.803 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.211 |
| SRR8749028 | MeJA induced 9h | 1.918 |
| SRR8749029 | MeJA induced 9h | 1.705 |
| SRR8749030 | Uninduced | 0.800 |
| SRR8749031 | Uninduced | 0.835 |
| SRR8749032 | Uninduced | 1.195 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.040 |
| SRR8400027 | Control - Root | 3.879 |