Gene detail

Gene detail information of Glyur000788s00032588.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G16520.3	3.00E-106	UDP-glucosyl transferase 88A1
NR	ABI94022.1	0	(iso)flavonoid glycosyltransferase [Medicago truncatula]
COG	YP_004904106.1	7.00E-07	putative macrolide glycosyltransferase [Kitasatospora setae KM-6054]
Swissprot	tr\|A6BM07\|I7GT1_SOYBN	0	Isoflavone 7-O-glucosyltransferase 1 (Precursor)
trEMBL	tr\|A6XNC3\|A6XNC3_MEDTR	0	UDP-glucosyl transferase 88A1 {ECO:0000313\|EMBL:KEH25708.1}

Sequence

Transcript Sequence

>Glyur000788s00032588.1
ATGAAGGACACTATAATTCTATACCCAGCTCTAGGTAGTGGACACCTAATGTCCATGGTTGAGCTAGGGAAACTCATATTAACCCAAAACCCTTCACTTTCCATCACAATTCTCATCCTCACACCACCCAACACCAAAATCAACAACAACAACAACAACAACACGTTTGGTTGTGAAGATTTCCCTTCTATTACTTTCCACTACATCCCTCCAATCTCATTCCCAAACACCCTCCCACCTCACATACTCACCCTTGAACTTTGTCGCCTAAGCAACCATCACGTGCACCACGTGCTACAATCCATCTCCAAAACCTCCAACCTCAAAGCCNTTGTCTTGGATTTCTTGAACTACAGCACAACACAAATCACATCTACAATTGACACCCCAACTTATTTTTACTACACCTCAGGGGCTTCCACTCTCTCTGTTTTTCTCCAGCTTCCGGCAATTCACAAAAAGTCCAATCGATCCCTTAAGGAAGACTCTCACATGCACCTTAGAATCCCCGGGTTACCGGCTATTCCGGTAGCGGACATGCCCGAGGAAGTGAAGGACCGTGAGAGTCAGAGTTACCAGGTTTACCTGGAGATAGCAACCAGCATGAGGGATAGTGATGGGGTTATTATAAACACCTTTGATGGAATTGAAGGAAGAGCTGTTAGAGCGTTGAGCGCTGGTTTGTGTCTTCCTGAGGGGAATACTCCACCTGTGTTCTGCATTGGACCCGTGGTTTCAGGTTCGGCAAAAACCATGGGTCGCGATGATGGGAATGGGTGTCTGAGTTGGCTCGACTCGCAACCGAGTCGAAGCGTCGTGTTGCTGAGCTTTGGGAGCATGGGGAGGTTCTCGAGGAGTCAGTTGAGGGAGATTGCTGTTGGGTTGGAGAGGAGTGGACAAAGATTCTTGTGGGTTGTTAGGAGCGAGTTGGGTGGTGGGGTTGACTCGGGGGATGAGCCGAGTTTGGAGGAGTTGTTGCCTGAGGGGTTTTTGGAGAAGACGGAAGGGAAGGGTTTGGTGGTTAGGAATTGGGCCCCACAGGCTGCGATACTGAATCATGACTCGGTTGGTGGGTTCGTGACTCACTGTGGGTGGAACTCGGTGTTGGAAGCGATTATTTGTGGGGTGCCCATGGTGGCGTGGCCTCTGTATGCAGAGCAAAAGCTGAACAAGGTGATTTTGGTAAAGGAAATGAAGGTGGCNTTGGAACTGAATAACGAGTCCAATGGGTTTGTGAGTGGGACTGAGTTGGGGGAGCGAGTTAAGGAGCTCATGGAATCGGAGAGAGGGAAAGAGATTAGAGAGAGGGTTTCGAAGATGAAAGTTAGTNCTAAGGAAGCAAGAGGAGGTGGTGGATCTTCCCTTGTTGCTCTGAAAAAGTTGGCAGAGTCATGGAAGGAGCACTCTTGTTTGAATAATAATTTGTCACCAAATTCACCGTTCAATCTTCACTGGCAATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00788	8599	10059	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0016758 transferase activity, transferring hexosyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000788s00032588.1	PF00201.13	UDPGT	256	438	3.00E-28

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	66.745
SRR1783600	control	66.826
SRR1783602	moderate drought stress	62.613
SRR1811619	moderate drought stress	62.435

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	38.173
DRR006520	Root Summer glycyrrhizin high producing strain	36.620
DRR006521	Root Winter glycyrrhizin high producing strain	317.044
DRR006522	Root Winter glycyrrhizin high producing strain	310.081
DRR006523	Root Summer glycyrrhizin low producing strain	64.165
DRR006524	Root Summer glycyrrhizin low producing strain	62.356
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.743
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.773

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	134.026
SRR2868004	Drought Stress (root)	134.982
SRR2967015	Control (root)	92.581

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	222.784
SRR9715740	Leaf	30.331
SRR9715741	Leaf	166.267
SRR9715739	Root	184.749
SRR9715742	Root	245.426
SRR9715743	Root	223.880

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	60.784
SRR8749028	MeJA induced 9h	87.080
SRR8749029	MeJA induced 9h	48.942
SRR8749030	Uninduced	2.763
SRR8749031	Uninduced	1.104
SRR8749032	Uninduced	4.987

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	225.614
SRR8400027	Control - Root	157.499