Gene detail information of Glyur000787s00032060 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G54040.1 | 3.00E-49 | PAR1 protein |
| NR | KHN27004.1 | 8.87E-108 | hypothetical protein glysoja_040812 [Glycine soja] |
| trEMBL | tr|I1J747|I1J747_SOYBN | 9.00E-108 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G26840.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00787 | 88852 | 91193 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000787s00032060.1 | PF06521.6 | PAR1 | 25 | 181 | 5.20E-69 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.585 |
| SRR1783600 | control | 6.328 |
| SRR1783602 | moderate drought stress | 3.237 |
| SRR1811619 | moderate drought stress | 2.969 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 40.984 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 39.590 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.865 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.622 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 58.988 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 59.234 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.404 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 53.712 |
| SRR2868004 | Drought Stress (root) | 133.272 |
| SRR2967015 | Control (root) | 75.312 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 599.813 |
| SRR9715740 | Leaf | 277.600 |
| SRR9715741 | Leaf | 775.224 |
| SRR9715739 | Root | 122.756 |
| SRR9715742 | Root | 189.266 |
| SRR9715743 | Root | 175.996 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 592.889 |
| SRR8749028 | MeJA induced 9h | 666.030 |
| SRR8749029 | MeJA induced 9h | 617.702 |
| SRR8749030 | Uninduced | 1289.402 |
| SRR8749031 | Uninduced | 497.706 |
| SRR8749032 | Uninduced | 597.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 40.129 |
| SRR8400027 | Control - Root | 71.892 |