Gene detail information of Glyur000787s00032055 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G76340.1 | 7.00E-145 | golgi nucleotide sugar transporter 3 |
| NR | XP_003516327.1 | 0 | PREDICTED: GDP-mannose transporter GONST3-like isoform X1 [Glycine max] |
| Swissprot | tr|Q9S845|GONS3_ARATH | 0 | GDP-mannose transporter GONST3 |
| trEMBL | tr|I1J760|I1J760_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G27060.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00787 | 35578 | 36732 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000787s00032055.1 | PF03151.11 | TPT | 232 | 336 | 1.70E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.046 |
| SRR1783600 | control | 8.799 |
| SRR1783602 | moderate drought stress | 8.111 |
| SRR1811619 | moderate drought stress | 8.151 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.849 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.575 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.002 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.956 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.279 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.504 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.992 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.137 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.799 |
| SRR2868004 | Drought Stress (root) | 20.763 |
| SRR2967015 | Control (root) | 17.891 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.094 |
| SRR9715740 | Leaf | 12.567 |
| SRR9715741 | Leaf | 8.751 |
| SRR9715739 | Root | 5.965 |
| SRR9715742 | Root | 8.079 |
| SRR9715743 | Root | 7.183 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 22.252 |
| SRR8749028 | MeJA induced 9h | 17.221 |
| SRR8749029 | MeJA induced 9h | 14.582 |
| SRR8749030 | Uninduced | 5.736 |
| SRR8749031 | Uninduced | 2.863 |
| SRR8749032 | Uninduced | 2.647 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.200 |
| SRR8400027 | Control - Root | 19.701 |