Gene detail information of Glyur000785s00024163 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G32400.1 | 9.00E-139 | Mitochondrial substrate carrier family protein |
| NR | XP_003603418.1 | 0 | Protein brittle-1 [Medicago truncatula] |
| Swissprot | tr|Q9SUV1|BRT1_ARATH | 0 | Adenine nucleotide transporter BT1, chloroplastic/mitochondrial (Precursor) |
| trEMBL | tr|G7JB41|G7JB41_MEDTR | 0 | Substrate carrier family protein {ECO:0000313|EMBL:AES73669.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00785 | 90889 | 94515 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000785s00024163.1 | PF00153.22 | Mito_carr | 97 | 180 | 2.80E-21 |
| Glyur000785s00024163.1 | PF00153.22 | Mito_carr | 188 | 276 | 1.50E-24 |
| Glyur000785s00024163.1 | PF00153.22 | Mito_carr | 283 | 375 | 1.10E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.789 |
| SRR1783600 | control | 5.746 |
| SRR1783602 | moderate drought stress | 4.910 |
| SRR1811619 | moderate drought stress | 4.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.335 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.056 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.800 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.613 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.647 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.555 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.083 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.246 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.448 |
| SRR2868004 | Drought Stress (root) | 18.113 |
| SRR2967015 | Control (root) | 16.514 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.834 |
| SRR9715740 | Leaf | 8.058 |
| SRR9715741 | Leaf | 5.748 |
| SRR9715739 | Root | 7.719 |
| SRR9715742 | Root | 8.295 |
| SRR9715743 | Root | 9.401 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.538 |
| SRR8749028 | MeJA induced 9h | 18.070 |
| SRR8749029 | MeJA induced 9h | 20.155 |
| SRR8749030 | Uninduced | 5.638 |
| SRR8749031 | Uninduced | 4.219 |
| SRR8749032 | Uninduced | 6.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.605 |
| SRR8400027 | Control - Root | 14.137 |