Gene detail

Gene detail information of Glyur000785s00024160

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G32390.1	1.00E-157	Nucleotide-sugar transporter family protein
NR	XP_004501317.1	0	PREDICTED: probable sugar phosphate/phosphate translocator At5g25400-like [Cicer arietinum]
Swissprot	tr\|Q9SUV2\|PT432_ARATH	0	Probable sugar phosphate/phosphate translocator At4g32390
trEMBL	tr\|G7JB38\|G7JB38_MEDTR	0	Nucleotide/sugar transporter family protein {ECO:0000313\|EMBL:AES73666.1}

Sequence

Transcript Sequence

>Glyur000785s00024160.1
ATGGGGAAAGGTGGATCTGTGAGCGATGGGGTGTTGAAGAAGATCGTGCTATCGTACACCTACGTGGCGATATGGATCTTCCTAAGCTTCACGGTGATCGTGTACAACAAGTACATCCTCGACAAGAAGATGTACAACTGGCCATTCCCGATCTCCCTCACCATGATCCACATGTCCTTCTGTGCCACCCTAGCAATCCTCCTCGTCCGTGTCTTCAAACTCGTCGACCCCGTTTCAATGTCACGTGATGTTTACCTCTCCTCCGTCGTCCCCATCGGAGCACTCTACTCTCTCTCCCTCTGGCTCTCAAATTCCGCTTACATCTACCTCTCCGTCTCCTTCATTCAAATGCTCAAAGCCCTCATGCCTGTTGCCGTTTACTCCATCGGCGTCCTCCTCCGTAAAGAGTCCTACAAAAACGACACCATGCTTAACATGCTCTCCATCTCCCTCGGCGTCGCCGTCGCCGCTTACGGCGAGGCTAGGTTCGATACCTGGGGCGTACTCCTCCAGCTCGGTGCCGTCGCATTCGAAGCCACACGACTCGTCATGATCCAAATCCTTTTAACCTCTAAAGGGATNTCGCTCAACCCAATTACCTCTCTCTACTACGTTGCTCCCTGTTGCCTCGTTTTCCTCTCTGTTCCTTGGATCCTCGTTGAGTACCCTATCTTGAAGGATACGTCGACGTTTCAACTCGACTTCGTTATCTTTGGGACCAATTCCCTGTGTGCTTTTGCTCTCAACCTTGCGGTTTTTCTCCTCGTTGGGAAGACCTCTGCTTTGACAATGAATGTCGCTGGTGTTGTTAAGGATTGGCTATTGATTGCGTTCTCTTGGTCGGTTATTAAGGATACGGTTACGCCGATTAATTTGTTTGGGTATGGGCTTGCGTTCTTGGGGGTGGCTTATTATAACCATTCAAAGTTGCAGGCGCTGAAGGCTAAGGAGGCGCAGAAGAAAACTGCGCAGGGTGATGATGATGAAGAGACGGGGAGGTTGCTTCAGGACAGAGAAGGAGATGGAGGAGCTGGGAAGAGGAATGACCAGCAGAATTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00785	77493	78551	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000785s00024160.1	PF03151.11	TPT	167	306	1.40E-33

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	217.212
SRR1783600	control	219.088
SRR1783602	moderate drought stress	109.885
SRR1811619	moderate drought stress	109.462

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	66.150
DRR006520	Root Summer glycyrrhizin high producing strain	64.051
DRR006521	Root Winter glycyrrhizin high producing strain	34.917
DRR006522	Root Winter glycyrrhizin high producing strain	33.760
DRR006523	Root Summer glycyrrhizin low producing strain	83.514
DRR006524	Root Summer glycyrrhizin low producing strain	82.004
DRR006525	Leaf Summer glycyrrhizin high producing strain	39.701
DRR006526	Leaf Summer glycyrrhizin high producing strain	39.064

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	68.449
SRR2868004	Drought Stress (root)	69.793
SRR2967015	Control (root)	51.055

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	39.783
SRR9715740	Leaf	44.009
SRR9715741	Leaf	59.396
SRR9715739	Root	186.913
SRR9715742	Root	106.738
SRR9715743	Root	115.001

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	82.808
SRR8749028	MeJA induced 9h	93.663
SRR8749029	MeJA induced 9h	39.349
SRR8749030	Uninduced	20.979
SRR8749031	Uninduced	4.948
SRR8749032	Uninduced	5.495

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	114.482
SRR8400027	Control - Root	120.938