Gene detail information of Glyur000785s00024157 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G47650.1 | 7.00E-20 | DnaJ/Hsp40 cysteine-rich domain superfamily protein |
| NR | KHN07084.1 | 1.40E-33 | hypothetical protein glysoja_023267 [Glycine soja] |
| trEMBL | tr|I1K8V8|I1K8V8_SOYBN | 5.00E-34 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G07270.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00785 | 63748 | 65789 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.136 |
| SRR1783600 | control | 0.652 |
| SRR1783602 | moderate drought stress | 1.791 |
| SRR1811619 | moderate drought stress | 1.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.736 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.371 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.414 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.156 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.621 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.665 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 34.314 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 34.327 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.470 |
| SRR2868004 | Drought Stress (root) | 1.141 |
| SRR2967015 | Control (root) | 1.587 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.102 |
| SRR9715740 | Leaf | 0.510 |
| SRR9715741 | Leaf | 0.046 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.111 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.031 |
| SRR8749028 | MeJA induced 9h | 0.289 |
| SRR8749029 | MeJA induced 9h | 1.078 |
| SRR8749030 | Uninduced | 1.056 |
| SRR8749031 | Uninduced | 0.307 |
| SRR8749032 | Uninduced | 0.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.918 |
| SRR8400027 | Control - Root | 0.976 |