Gene detail information of Glyur000785s00024156 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G26660.1 | 1.00E-29 | SPX domain gene 2 |
| NR | KHN08128.1 | 1.60E-57 | SPX domain-containing protein 2 [Glycine soja] |
| Swissprot | tr|O48781|SPX2_ARATH | 1.00E-34 | SPX domain-containing protein 2 |
| trEMBL | tr|K7KIJ6|K7KIJ6_SOYBN | 1.00E-57 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G07160.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00785 | 62791 | 64134 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.315 |
| SRR1783600 | control | 0.962 |
| SRR1783602 | moderate drought stress | 1.211 |
| SRR1811619 | moderate drought stress | 0.856 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.408 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.948 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.020 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.475 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.878 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.670 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.622 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.416 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.291 |
| SRR2868004 | Drought Stress (root) | 16.761 |
| SRR2967015 | Control (root) | 12.613 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.648 |
| SRR9715741 | Leaf | 0.407 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.076 |
| SRR9715743 | Root | 0.295 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.689 |
| SRR8749028 | MeJA induced 9h | 3.193 |
| SRR8749029 | MeJA induced 9h | 7.144 |
| SRR8749030 | Uninduced | 6.146 |
| SRR8749031 | Uninduced | 4.682 |
| SRR8749032 | Uninduced | 4.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.448 |
| SRR8400027 | Control - Root | 1.048 |