Gene detail information of Glyur000785s00024151 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25360.2 | 2.00E-40 | |
| NR | XP_004501332.1 | 1.86E-84 | PREDICTED: uncharacterized protein LOC101496661 isoform X1 [Cicer arietinum] |
| trEMBL | tr|I1K8V0|I1K8V0_SOYBN | 1.00E-75 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G07210.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00785 | 34143 | 38257 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000785s00024151.1 | PF13259.1 | DUF4050 | 103 | 231 | 3.90E-21 |
| Glyur000785s00024151.2 | PF13259.1 | DUF4050 | 44 | 172 | 1.70E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.532 |
| SRR1783600 | control | 13.426 |
| SRR1783602 | moderate drought stress | 20.401 |
| SRR1811619 | moderate drought stress | 20.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.002 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.636 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 30.270 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 30.006 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.209 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.174 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.203 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.425 |
| SRR2868004 | Drought Stress (root) | 27.695 |
| SRR2967015 | Control (root) | 37.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.571 |
| SRR9715740 | Leaf | 9.426 |
| SRR9715741 | Leaf | 8.888 |
| SRR9715739 | Root | 1.754 |
| SRR9715742 | Root | 4.529 |
| SRR9715743 | Root | 4.868 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.454 |
| SRR8749028 | MeJA induced 9h | 31.405 |
| SRR8749029 | MeJA induced 9h | 23.200 |
| SRR8749030 | Uninduced | 65.172 |
| SRR8749031 | Uninduced | 111.940 |
| SRR8749032 | Uninduced | 100.886 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.405 |
| SRR8400027 | Control - Root | 22.914 |