Gene detail

Gene detail information of Glyur000784s00031237

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G59960.1	2.00E-87	NAD(P)-linked oxidoreductase superfamily protein
NR	XP_003547552.1	9.85E-173	PREDICTED: NAD(P)H-dependent 6'-deoxychalcone synthase-like [Glycine max]
COG	YP_007469167.1	2.00E-61	aldo/keto reductase, diketogulonate reductase [Desulfocapsa sulfexigens DSM 10523]
Swissprot	tr\|Q9SQ64\|COR2_PAPSO	5.00E-123	Non-functional NADPH-dependent codeinone reductase 2
trEMBL	tr\|I1MHQ4\|I1MHQ4_SOYBN	4.00E-173	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA15G21740.1}

Sequence

Transcript Sequence

>Glyur000784s00031237.1
CACGTATCCCCCTGTTCCATCACGAGTTGCCTTGTGACACAAAAACATGTCTTCATCAAAAGTGCCTCATGTGGTGCTCCAATCCTTCTCCGACCATTGCAACATGCCGGTGATTGGACTGGGAACTGCTTCGTTTGCCACCAGCGATGCCACAAAAGTGGCAGTAGTAGAGGCTATTAAACTTGGTTACAGACACTTTGACACGGCTTCAATATATGGGTCAGAGGAGGCCCTTGGTGAAGCCATAGCTGAAGCACTTCAACTTGGCCTCATAGGTTCCAGAGATGAACTCTTTGTCACTTCCAAGCTTTGGTGCTCCCATAATCATCCTCATCTTGTTGTTCCTGCTCTGCAGAAAACACTTCAGTCTCTAAAACTAGAATATCTAGATCTTTATTTGATCCATTGGCCCATTGCTCTGAAGCCTGGAAATTGGAAAATTCCTTATGATGAAGAGGCTCTAACATCATTCGACTTAAAGGATGTCTGGACAGCAATGGAGGAATGCCAAAAACTGGGCCTTACAAAATGCATTGGAGTGAGCAACTTCAGTTGCAAAAAGCTTGAAACTTTACTCTCCTTTGCTAATATTCCTCCTTCTATCAACCAAGTTGAGATGAATCCTACTTGGCAACAAAAGAAGTTAAGGGAATATTGCCAATCAAAAGGTATAATCATAACTGCATACTCTCCTTTGGGAGCCAAGGGTAGCAAATGGGGCACCAATGATGTTATGGACAATGAATTGCTCAAGGAAATTGCCGATACTCAAGGCAAATCTGTTTTGGTGTGTCACATTAAAGTGATGGGCTCGGCTGTTAAGAGCTACAACAAGGAGAGGATGAAGCAAAACTTGGAAATATTTGATTGGTGTCTGACAAAAGAAGATTATGAAAAGATTAATCAAATCAAGCAACAACGTTGTTCGGTGAATGGACCAGCAAAGTACATTTATGACCTTTGGGATGGAGAAAATTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00784	68837	72593	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function
GO:0016491 oxidoreductase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000784s00031237.1	PF00248.16	Aldo_ket_red	23	289	2.90E-46

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.578
SRR1783600	control	0.653
SRR1783602	moderate drought stress	0.774
SRR1811619	moderate drought stress	0.720

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.084
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	3.165
DRR006524	Root Summer glycyrrhizin low producing strain	3.838
DRR006525	Leaf Summer glycyrrhizin high producing strain	22.406
DRR006526	Leaf Summer glycyrrhizin high producing strain	22.949

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.822
SRR2868004	Drought Stress (root)	4.308
SRR2967015	Control (root)	0.895

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	201.830
SRR9715740	Leaf	148.779
SRR9715741	Leaf	504.877
SRR9715739	Root	1.216
SRR9715742	Root	4.701
SRR9715743	Root	4.781

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.133
SRR8749028	MeJA induced 9h	6.831
SRR8749029	MeJA induced 9h	4.583
SRR8749030	Uninduced	136.992
SRR8749031	Uninduced	200.888
SRR8749032	Uninduced	127.070

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.949
SRR8400027	Control - Root	5.391