Gene detail

Gene detail information of Glyur000783s00023130

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G21070.1	4.00E-154	Nucleotide-sugar transporter family protein
NR	XP_006590383.1	0	PREDICTED: UDP-galactose transporter 2-like [Glycine max]
Swissprot	tr\|Q9SRE4\|UGAL2_ARATH	0	UDP-galactose transporter 2
trEMBL	tr\|I1LFM6\|I1LFM6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA11G00210.1}

Sequence

Transcript Sequence

>Glyur000783s00023130.1
TTTCTTTTTCTTTTCCTTTCCCTTTCACTTTGTTTTGCTAACCAAACATAGGATAGGACGATTGAGAGGTTTTTTTTGGGCGTACATATTCCAAGGCTCCATCCATGTGAGTGTTAACTGTTAAGGAACTTCCTCAGTAAAATAAAAGAAATTTACAGATTTAGAGAGGTGGAGGCGAAGACNCAGAAGGAGACAATAATGTGAAGGCGAGGAAAGGAACGGGAAAGTGTTGTTGGAGGAGAGACAGATAGAAAGGCAGAACTGCTATCAGCGGACTAAAGTGTTAAATCGGCAAACACTCCTCCCTCACTTTCTTTATTCTCTTGTAATCCGAGTCCTTTCTTCCCATTCTCTTTCCCAGTCGACGCAACCTTTCAGATTGAAGTTCAAATTGATTTTGAATTCCGAACATCCAAATAAGCCCGTCTCTTTCTTTCCNCTGGGATCTGTCGTGACGGAATATCATTATCATATCTGTGTACTATTTTTCTTCCTCAGATCTGGTCTCCGTATTGTGGTTAACCCTTTGATAATCGATATTGTTCTTTCTTGTATATACACACAAGTTAAATTAACCACAATTTCCGAAATAGAAGATGGAGAGCGAAAAGAAATCGTCGCCGATATCTAACATGGGAGCATGGGCTATGAACGTTGTCAGCTCCGTTGGAATTATCATGGCTAATAAACAGCTCATGTCTAACAATGGCTTTGCTTTCAGCTTCGCAACTACGTTGACTGGGTTCCACTTTGCTGTAACTGCTATCGTGGGTCTGGTGTCAAATGCTACTGGTTATTCTGCGTCAAAGCATGTTCCTATGTGGGAGCTCATTTGGTTCTCAGCAATTGCCAATGTCTCTATCACAGGGATGAACTTCAGCCTTATGCTAAATTCTGTTGGATTCTACCAAATATCAAAACTAAGCATGATTCCTGTGGTTTGTGTGATGGAATGGATCCTTCACAGCAAACACTACTCAAGAGAAGTGAAAATGTCAGTCATGGTTGTGGTTGTTGGTGTTGGTGTTTGCACTGTAACTGATGTAAAAGTTAACCTCAAAGGTTTCGTGTGTGCCTGTCTTGCAGTTTTATCAACATCTTTACAGCAAATTTCAATTGGTTCTCTACAAAAGAAATATTCAATTGGATCTTTTGAATTGCTGAGTAAGACTGCTCCTATTCAAGCCCTCTCTCTTCTTATTCTTGGCCCATTTGTTGATTACTATCTTAGTGGCAAGTTGATAACCAACTATAAGATGTCTTCTGGTGCCATTTTATTCATTCTTCTTTCATGCACCCTAGCTGTATTTTGCAATGTGAGCCAGTATCTCTGCATTGGGCGCTTCTCAGCGGTTTCCTTCCAGGTTTTGGGCCACATGAAAACAGTATGTGTTCTGACGTTGGGGTGGCTGCTATTTGATTCAGAGCTAACTTTCAAGAATATCATGGGAATGATTCTCGCAGTTGTTGGCATGATAATTTATAGTTGGGCTGTGGAGCTTGAAAAGCAATCAAATGCCAAGACTCATCCTCATGCAAAAAACAGCCTGACAGAAGAAGAAATTAGGCTATTGAAGGAAGGAGTAGAAAACAGTCCGTTGAAGGATGTTGAACTTGGTGAGGCTAAAGTGCTTTATATATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00783	96847	116075	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000783s00023130.1	PF03151.11	TPT	156	298	1.40E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	32.301
SRR1783600	control	32.453
SRR1783602	moderate drought stress	21.982
SRR1811619	moderate drought stress	21.583

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	37.750
DRR006520	Root Summer glycyrrhizin high producing strain	37.164
DRR006521	Root Winter glycyrrhizin high producing strain	27.603
DRR006522	Root Winter glycyrrhizin high producing strain	26.514
DRR006523	Root Summer glycyrrhizin low producing strain	33.421
DRR006524	Root Summer glycyrrhizin low producing strain	33.079
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.599
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.691

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	108.743
SRR2868004	Drought Stress (root)	76.344
SRR2967015	Control (root)	80.593

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	26.014
SRR9715740	Leaf	22.754
SRR9715741	Leaf	23.296
SRR9715739	Root	14.657
SRR9715742	Root	29.701
SRR9715743	Root	29.846

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	52.885
SRR8749028	MeJA induced 9h	39.083
SRR8749029	MeJA induced 9h	30.267
SRR8749030	Uninduced	12.965
SRR8749031	Uninduced	9.247
SRR8749032	Uninduced	11.145

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	81.233
SRR8400027	Control - Root	95.698