Gene detail information of Glyur000782s00036634 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G07350.2 | 2.00E-42 | TUDOR-SN protein 1 |
| NR | XP_007137828.1 | 1.11E-68 | hypothetical protein PHAVU_009G159000g [Phaseolus vulgaris] |
| trEMBL | tr|V7AW02|V7AW02_PHAVU | 4.00E-69 | Uncharacterized protein {ECO:0000313|EMBL:ESW09822.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00782 | 74027 | 75370 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000782s00036634.1 | PF00565.12 | SNase | 50 | 149 | 2.40E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.176 |
| SRR1783600 | control | 0.249 |
| SRR1783602 | moderate drought stress | 0.410 |
| SRR1811619 | moderate drought stress | 0.494 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.070 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.620 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.463 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.053 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.147 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.260 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.467 |
| SRR2868004 | Drought Stress (root) | 0.523 |
| SRR2967015 | Control (root) | 0.929 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.841 |
| SRR9715740 | Leaf | 1.601 |
| SRR9715741 | Leaf | 1.281 |
| SRR9715739 | Root | 0.679 |
| SRR9715742 | Root | 1.026 |
| SRR9715743 | Root | 0.604 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.803 |
| SRR8749028 | MeJA induced 9h | 1.233 |
| SRR8749029 | MeJA induced 9h | 1.129 |
| SRR8749030 | Uninduced | 3.762 |
| SRR8749031 | Uninduced | 0.366 |
| SRR8749032 | Uninduced | 2.267 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.891 |
| SRR8400027 | Control - Root | 0.606 |