Gene detail information of Glyur000782s00036633 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G09320.1 | 3.00E-06 | agenet domain-containing protein |
| NR | XP_004302287.1 | 7.18E-08 | PREDICTED: uncharacterized protein LOC101303819 isoform 1 [Fragaria vesca subsp. vesca] |
| trEMBL | tr|V7BKB8|V7BKB8_PHAVU | 3.00E-08 | Uncharacterized protein {ECO:0000313|EMBL:ESW17011.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00782 | 64313 | 73570 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.699 |
| SRR1783600 | control | 0.646 |
| SRR1783602 | moderate drought stress | 0.167 |
| SRR1811619 | moderate drought stress | 0.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.516 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.339 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.127 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.739 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.890 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.039 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.540 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.492 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.551 |
| SRR2868004 | Drought Stress (root) | 7.901 |
| SRR2967015 | Control (root) | 9.593 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.093 |
| SRR9715740 | Leaf | 0.157 |
| SRR9715741 | Leaf | 0.117 |
| SRR9715739 | Root | 0.234 |
| SRR9715742 | Root | 0.282 |
| SRR9715743 | Root | 0.297 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.745 |
| SRR8749028 | MeJA induced 9h | 4.108 |
| SRR8749029 | MeJA induced 9h | 2.676 |
| SRR8749030 | Uninduced | 1.932 |
| SRR8749031 | Uninduced | 3.096 |
| SRR8749032 | Uninduced | 1.810 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.612 |
| SRR8400027 | Control - Root | 0.457 |