Gene detail information of Glyur000781s00024271 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G13550.1 | 0 | triglyceride lipases;triglyceride lipases |
| NR | XP_006589063.1 | 0 | PREDICTED: uncharacterized protein LOC100789825 isoform X1 [Glycine max] |
| COG | YP_007155256.1 | 2.00E-19 | lipase class 3 [Anabaena cylindrica PCC 7122] |
| Swissprot | tr|A2ZW16|PLA1_ORYSJ | 8.00E-14 | Phospholipase A1-II 1 |
| trEMBL | tr|K7LJ53|K7LJ53_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G26471.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00781 | 94674 | 109499 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000781s00024271.1 | PF00168.25 | C2 | 129 | 194 | 6.90E-14 |
| Glyur000781s00024271.1 | PF01764.20 | Lipase_3 | 588 | 739 | 3.60E-34 |
| Glyur000781s00024271.2 | PF00168.25 | C2 | 129 | 194 | 6.70E-14 |
| Glyur000781s00024271.2 | PF01764.20 | Lipase_3 | 584 | 718 | 3.00E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.968 |
| SRR1783600 | control | 2.027 |
| SRR1783602 | moderate drought stress | 3.518 |
| SRR1811619 | moderate drought stress | 3.553 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.481 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.776 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.394 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.168 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.174 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.352 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.988 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.082 |
| SRR2868004 | Drought Stress (root) | 8.603 |
| SRR2967015 | Control (root) | 8.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.926 |
| SRR9715740 | Leaf | 15.313 |
| SRR9715741 | Leaf | 14.155 |
| SRR9715739 | Root | 0.677 |
| SRR9715742 | Root | 3.809 |
| SRR9715743 | Root | 3.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.239 |
| SRR8749028 | MeJA induced 9h | 2.899 |
| SRR8749029 | MeJA induced 9h | 1.907 |
| SRR8749030 | Uninduced | 1.285 |
| SRR8749031 | Uninduced | 0.592 |
| SRR8749032 | Uninduced | 0.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.693 |
| SRR8400027 | Control - Root | 8.634 |