Gene detail information of Glyur000781s00024267 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003555729.1 | 8.55E-20 | PREDICTED: small acidic protein 1-like [Glycine max] |
| Swissprot | tr|Q1ECS0|SMAP2_ARATH | 5.00E-06 | Small acidic protein 2 |
| trEMBL | tr|I1NEL3|I1NEL3_SOYBN | 3.00E-20 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G20900.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00781 | 87970 | 88988 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 44.673 |
| SRR1783600 | control | 46.335 |
| SRR1783602 | moderate drought stress | 14.413 |
| SRR1811619 | moderate drought stress | 23.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 38.696 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 34.465 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.312 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.210 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.248 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.149 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.557 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.996 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.314 |
| SRR2868004 | Drought Stress (root) | 20.855 |
| SRR2967015 | Control (root) | 20.855 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.226 |
| SRR9715740 | Leaf | 19.381 |
| SRR9715741 | Leaf | 14.495 |
| SRR9715739 | Root | 13.850 |
| SRR9715742 | Root | 12.162 |
| SRR9715743 | Root | 10.823 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.118 |
| SRR8749028 | MeJA induced 9h | 5.767 |
| SRR8749029 | MeJA induced 9h | 9.651 |
| SRR8749030 | Uninduced | 8.568 |
| SRR8749031 | Uninduced | 8.837 |
| SRR8749032 | Uninduced | 2.404 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.362 |
| SRR8400027 | Control - Root | 13.578 |