Gene detail information of Glyur000780s00032001 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G02040.1 | 7.00E-08 | |
| NR | XP_007155123.1 | 5.46E-36 | hypothetical protein PHAVU_003G175500g [Phaseolus vulgaris] |
| trEMBL | tr|V7CAB6|V7CAB6_PHAVU | 2.00E-36 | Uncharacterized protein {ECO:0000313|EMBL:ESW27117.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00780 | 8184 | 8678 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.392 |
| SRR1783600 | control | 12.487 |
| SRR1783602 | moderate drought stress | 16.313 |
| SRR1811619 | moderate drought stress | 15.855 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.105 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.393 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.837 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.480 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.209 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.756 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.718 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.837 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.678 |
| SRR2868004 | Drought Stress (root) | 7.029 |
| SRR2967015 | Control (root) | 6.685 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.353 |
| SRR9715740 | Leaf | 4.764 |
| SRR9715741 | Leaf | 4.418 |
| SRR9715739 | Root | 6.612 |
| SRR9715742 | Root | 7.952 |
| SRR9715743 | Root | 7.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.001 |
| SRR8749028 | MeJA induced 9h | 1.780 |
| SRR8749029 | MeJA induced 9h | 1.015 |
| SRR8749030 | Uninduced | 0.965 |
| SRR8749031 | Uninduced | 0.509 |
| SRR8749032 | Uninduced | 2.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.951 |
| SRR8400027 | Control - Root | 12.055 |