Gene detail information of Glyur000780s00032000 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KGN46173.1 | 5.90E-07 | hypothetical protein Csa_6G062320 [Cucumis sativus] |
| trEMBL | tr|A0A0A0K9L3|A0A0A0K9L3_CUCSA | 2.00E-07 | Uncharacterized protein {ECO:0000313|EMBL:KGN46173.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00780 | 6408 | 8640 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.489 |
| SRR1783600 | control | 5.295 |
| SRR1783602 | moderate drought stress | 5.103 |
| SRR1811619 | moderate drought stress | 5.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.629 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.569 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.931 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.625 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.723 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.747 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.223 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.841 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.939 |
| SRR2868004 | Drought Stress (root) | 12.083 |
| SRR2967015 | Control (root) | 10.320 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.961 |
| SRR9715740 | Leaf | 10.310 |
| SRR9715741 | Leaf | 6.654 |
| SRR9715739 | Root | 8.008 |
| SRR9715742 | Root | 9.703 |
| SRR9715743 | Root | 12.937 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.945 |
| SRR8749028 | MeJA induced 9h | 5.386 |
| SRR8749029 | MeJA induced 9h | 2.338 |
| SRR8749030 | Uninduced | 3.603 |
| SRR8749031 | Uninduced | 1.595 |
| SRR8749032 | Uninduced | 3.773 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.738 |
| SRR8400027 | Control - Root | 15.971 |