Gene detail

Gene detail information of Glyur000780s00031998

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G02050.1	0	sugar transporter protein 7
NR	XP_003546610.1	0	PREDICTED: sugar transport protein 7-like [Glycine max]
COG	YP_006180545.1	2.00E-66	MFS-type transporter [Halobacillus halophilus DSM 2266]
Swissprot	tr\|O04249\|STP7_ARATH	0	Sugar transport protein 7
trEMBL	tr\|I1MI11\|I1MI11_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA15G24710.1}

Sequence

Transcript Sequence

>Glyur000780s00031998.1
AATTTTTTGAGTAACAAATAATAATAATAATAAGATGAAATATAGATTCTATCGAAGTATGGCCACGGGGGCAAATACGGCCAAACATTAAATACAGAGTTATTTCAATCACAAGATAAAGTTTTTAACAAAATCATATTATGGTCATATGGTTTGACTTATAATATAAACTTTTGAGCAAGCATGGGAATGATTTTTCATTCGTGAAGGTGGAAAAACCATTCTCTCCTTTGTATGANTTTGAGAAAGGAGAAGAATCAAGGAAATGGCAGGTGGGTCTTTCACTGCTGGTGGTGCTGTGGATAAGGAGAGGGCAGAGCAGTACAAAGGGAGAGTCACTGCTTATGTCATCATCGCTTGCATTGTTGCTGCCACTGGAGGGTCCCTCTTTGGCTATGATATTGGGATTTCAGGAGGGGTTACTTCTATGGATGACTTCCTTAAAGATTTCTTCCCCTCAGTATATAAACAGAAAATGCACGCACATGAAAACAACTACTGCAAGTATGACAATCAGGGNCTTGCAGCATTTACCTCTTCTCTGTACATTGCTGGTTTAGTTGCATCACTGATGGCATCTCCCGTTACAAGGAAGTATGGACGCCGGACAAGTATCATAGGCGGTGGTATCAGCTTTCTTATTGGATCAGCTCTGAATGCTTCAGCTGTTAACCTGGCAATGCTTATCTTGGGTCGGGCAATTCCGCTTTATTTGTCAGAGATGGCACCAACCCACCTTAGAGGAGGCTTGAACATGATGTTTCAAGTGGCAACCACATTTGGGATTTTCACAGCCAACATGGTCAATTATGGAACACAAAAGATTAGACCTTGGGGTTGGAGGCTATCCCTAGGCTTGGCTTCAATACCGGCACTGCTGATGACTATAGGAGGAATATTCCTCCCAGAGACACCAAACAGCTTAATAGAAAGAGGNTCAAAGGAAAAAGGAAGAAAGCTCCTTGAAAGAATCAGAGGAACTAATGAGGTTGATGCAGAGTTTCAAGATATGGCTGATGCAAGTGAATTGGCAAACTCAATAGAGCACCCTTTTCGTAACATACTTGAAAGAAGGTATAGGCCAGAGTTGGTGATGGCAATCTTCATGCCTACTTTTCAGATCCTTACTGGCATAAATTCCATTCTCTTCTATGCTCCTGTGCTGTTTCAAAGCATGGGATTTGAAGGAGATGCGTCCCTATATTCCTCAGCTTTGACTGGTGGAGTTCTTGCTTTCTCAACATTCATTTCTATTGCCACAGTTGATAGGTTGGGAAGGAGAGTTCTTCTTATCACTGGTGGAGTACAAATGATCACGTGCCAGATTATAGTTGCCATAATTTTGGGGATCAAGTTCGGGGAGGGCAATGAATTATCCAAGAGCTATTCAATATTGGTTGTAGTTGTGATATGCCTATTTGTTCTAGCTTTTGGATATTCATGGGGCCCACTTGGATGGACAGTCCCAAGTGAGATATTCCCATTGGAAATCCGTTCGGCAGGGCAAAGCATCACGGTTGCGGTAAACCTTCTCTTCACTTTCATCATTGCTCAGGCCTTCCTTGCCCTTCTCTGCTCATTCAAGTTTGGGATCTTTCTCTTCTTCGCTGGCTGGATTACCATCATGACCATATTTGTTTTCCTGTTCCTACCTGAAACCAAGGGAATCCCCATTGAAGAGATGGCATTTATGTGGAGGAAGCACTGGTTCTGGAAAAAGATACTGCCTTACTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00780	866	5805	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055085 transmembrane transport

cellular_component

GO:0016020 membrane

GO:0016021 integral component of membrane

molecular_function

GO:0005215 transporter activity

GO:0022857 transmembrane transporter activity

GO:0022891 substrate-specific transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000780s00031998.1	PF00083.19	Sugar_tr	32	477	1.90E-115

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.720
SRR1783600	control	2.616
SRR1783602	moderate drought stress	1.158
SRR1811619	moderate drought stress	1.300

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.562
DRR006520	Root Summer glycyrrhizin high producing strain	0.470
DRR006521	Root Winter glycyrrhizin high producing strain	0.235
DRR006522	Root Winter glycyrrhizin high producing strain	0.229
DRR006523	Root Summer glycyrrhizin low producing strain	0.989
DRR006524	Root Summer glycyrrhizin low producing strain	1.105
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.169
DRR006526	Leaf Summer glycyrrhizin high producing strain	6.326

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.902
SRR2868004	Drought Stress (root)	9.727
SRR2967015	Control (root)	11.392

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	21.863
SRR9715740	Leaf	21.934
SRR9715741	Leaf	37.072
SRR9715739	Root	2.457
SRR9715742	Root	2.177
SRR9715743	Root	1.955

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.396
SRR8749028	MeJA induced 9h	8.766
SRR8749029	MeJA induced 9h	4.369
SRR8749030	Uninduced	9.310
SRR8749031	Uninduced	5.096
SRR8749032	Uninduced	3.498

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	7.573
SRR8400027	Control - Root	7.215