Gene detail information of Glyur000779s00022840


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G65220.12.00E-36Ribosomal L29 family protein
NRXP_004504080.11.57E-84PREDICTED: 50S ribosomal protein L29, chloroplastic-like [Cicer arietinum]
COGYP_007169476.14.00E-0650S ribosomal protein L29 [Halothece sp. PCC 7418]
Swissprottr|Q9FJP3|RK29_ARATH5.00E-5850S ribosomal protein L29, chloroplastic (Precursor)
trEMBLtr|V7CRX9|V7CRX9_PHAVU8.00E-78Uncharacterized protein {ECO:0000313|EMBL:ESW31656.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold007797725180469-


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000779s00022840.1PF00831.18Ribosomal_L29621183.80E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control31.391
SRR1783600control31.282
SRR1783602moderate drought stress22.467
SRR1811619moderate drought stress22.387

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain30.398
DRR006520Root Summer glycyrrhizin high producing strain29.666
DRR006521Root Winter glycyrrhizin high producing strain16.718
DRR006522Root Winter glycyrrhizin high producing strain16.512
DRR006523Root Summer glycyrrhizin low producing strain19.827
DRR006524Root Summer glycyrrhizin low producing strain20.341
DRR006525Leaf Summer glycyrrhizin high producing strain226.483
DRR006526Leaf Summer glycyrrhizin high producing strain225.688

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)25.348
SRR2868004Drought Stress (root)21.746
SRR2967015Control (root)19.762

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf103.019
SRR9715740Leaf130.917
SRR9715741Leaf73.505
SRR9715739Root13.145
SRR9715742Root9.375
SRR9715743Root8.218

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h30.813
SRR8749028MeJA induced 9h12.162
SRR8749029MeJA induced 9h16.372
SRR8749030Uninduced9.694
SRR8749031Uninduced3.538
SRR8749032Uninduced5.648

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root28.344
SRR8400027Control - Root25.498

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved