Gene detail information of Glyur000779s00022835 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G04160.1 | 6.00E-148 | Nucleotide-sugar transporter family protein |
| NR | XP_007162162.1 | 0 | hypothetical protein PHAVU_001G129500g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FYE5|PT504_ARATH | 0 | Probable sugar phosphate/phosphate translocator At5g04160 |
| trEMBL | tr|V7CZ39|V7CZ39_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW34156.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00779 | 43994 | 47193 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000779s00022835.1 | PF03151.11 | TPT | 209 | 352 | 5.60E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.676 |
| SRR1783600 | control | 12.550 |
| SRR1783602 | moderate drought stress | 7.106 |
| SRR1811619 | moderate drought stress | 7.094 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.003 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.036 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.593 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.517 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.578 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.572 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.414 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 41.523 |
| SRR2868004 | Drought Stress (root) | 18.072 |
| SRR2967015 | Control (root) | 17.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.002 |
| SRR9715740 | Leaf | 2.954 |
| SRR9715741 | Leaf | 5.230 |
| SRR9715739 | Root | 7.719 |
| SRR9715742 | Root | 6.615 |
| SRR9715743 | Root | 5.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.990 |
| SRR8749028 | MeJA induced 9h | 5.012 |
| SRR8749029 | MeJA induced 9h | 6.243 |
| SRR8749030 | Uninduced | 1.891 |
| SRR8749031 | Uninduced | 0.398 |
| SRR8749032 | Uninduced | 2.545 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.737 |
| SRR8400027 | Control - Root | 28.870 |