Gene detail information of Glyur000779s00022833 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G09430.1 | 2.00E-90 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004504092.1 | 1.98E-155 | PREDICTED: monoacylglycerol lipase ABHD6-like [Cicer arietinum] |
| COG | YP_132656.1 | 9.00E-20 | hypothetical protein PBPRB0984 [Photobacterium profundum SS9] |
| Swissprot | tr|O22975|LPAAT_ARATH | 1.00E-06 | 1-acylglycerol-3-phosphate O-acyltransferase |
| trEMBL | tr|V7CRY4|V7CRY4_PHAVU | 2.00E-144 | Uncharacterized protein {ECO:0000313|EMBL:ESW31661.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00779 | 25337 | 28299 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000779s00022833.1 | PF12697.2 | Abhydrolase_6 | 53 | 177 | 3.30E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.366 |
| SRR1783600 | control | 9.585 |
| SRR1783602 | moderate drought stress | 19.143 |
| SRR1811619 | moderate drought stress | 19.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.214 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.699 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.751 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.694 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.914 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.297 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.201 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.994 |
| SRR2868004 | Drought Stress (root) | 12.211 |
| SRR2967015 | Control (root) | 12.971 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.324 |
| SRR9715740 | Leaf | 43.873 |
| SRR9715741 | Leaf | 31.914 |
| SRR9715739 | Root | 9.555 |
| SRR9715742 | Root | 18.073 |
| SRR9715743 | Root | 13.683 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.072 |
| SRR8749028 | MeJA induced 9h | 4.355 |
| SRR8749029 | MeJA induced 9h | 5.678 |
| SRR8749030 | Uninduced | 1.435 |
| SRR8749031 | Uninduced | 0.543 |
| SRR8749032 | Uninduced | 1.543 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.422 |
| SRR8400027 | Control - Root | 15.330 |