Gene detail

Gene detail information of Glyur000776s00026216

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G14200.1	1.00E-45	Chaperone DnaJ-domain superfamily protein
NR	AFK42830.1	7.07E-139	unknown [Lotus japonicus]
COG	YP_005472044.1	5.00E-15	chaperone protein DnaJ [Fervidobacterium pennivorans DSM 9078]
Swissprot	tr\|Q9FH28\|DNJ49_ARATH	6.00E-14	Chaperone protein dnaJ 49
trEMBL	tr\|I3SRD8\|I3SRD8_LOTJA	3.00E-139	Uncharacterized protein {ECO:0000313\|EMBL:AFK42830.1}

Sequence

Transcript Sequence

>Glyur000776s00026216.1
CTAGCAGCCTAAAATTAAATGCCATGTTCCGTGTCCCTAATCACAAACATGTAGCCGAAAACCCAAGTTGTCATCCAAGTTGTTATATTATATAATATATATATATATATATAATATAATAATATAATTAGTTAGATATATAAAAACGTAGTAANATTGTTGTGATTGTGTATGTGTGTTTGTGATTTTGGTGTCTCTTTTTATGTTATGGTTGTACGGAATNTGTGTTTTGGTTTGGTTGGCCTTGGTTGATTCAATTCGCCGACAACAAACCTTAGTTTTGAGTGTTTTGACAAAATCTGATTGGTTTTCTGGAGAGTTTTCGTTTGATCTGGTTGGTTAGTGCTGTTTCTCAAAGGTGCTGGTTGTGAAAGTTTGGATTGTTGTTGTTGTTGTTGGGAGAGAACAATGGCTAAGGAAGGAGACAAAGGAAATGACTTCTATGCAGTTTTGGGTTTGAATAAGGAATGCACTGAATCAGAGCTAAGGAATGCATATAAGAGACTTGCACTGAAATGGCATCCAGATCGTTGTTCAGCATCCGGGAATNTGAAATTCGTTGAAGAAGCTAAGAAGAAATTCCAGGCAATTCAGGAAGCCTATTCTGTTTTATCTGACGCGAACAAGAGGTTAATGTACGACGTAGGAGTCTACGACAGTGATGACGACGAAAACGGGATGGGGGACTTCTTGAACGAAATGGTTACAATNATGAGTCAGACTAAACCAAATGAAAATGGAGAGGAAAGCTTTGAGGAGTTGCAACGGCTCTTTGAAGATATGTTTCAAGCAGATATTGGATTAGATGGAAGCACATCTCTTGCTGCTGCTGGTTGCTCTACTTCATCTACTTTCATGACTTACAATGAAGGTTCTAATTCAAATAAACGCAATTCCTCCGAGATGAATTTTGGGAAGGCAGAGGATTCTTCTGTCTTCGATGCCAATTACAAGAACTTCTGTTTTGGGGCGAAGCACCACCAAGATGTGGAGAAGGGAAACGGGGGAATTCAAGGAGGAGGAGGTAGCAGCAGCAGACAGAGAAACGGCAGAAAGCAAAAAATCTCATATGGTCATGATGTTTCCTCTAATGACCACACTGGAATTTCTGCTAATTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00776	69342	72834	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000776s00026216.1	PF00226.26	DnaJ	10	78	1.90E-23

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	34.400
SRR1783600	control	35.272
SRR1783602	moderate drought stress	27.705
SRR1811619	moderate drought stress	27.939

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	82.070
DRR006520	Root Summer glycyrrhizin high producing strain	79.094
DRR006521	Root Winter glycyrrhizin high producing strain	39.546
DRR006522	Root Winter glycyrrhizin high producing strain	37.767
DRR006523	Root Summer glycyrrhizin low producing strain	56.127
DRR006524	Root Summer glycyrrhizin low producing strain	57.203
DRR006525	Leaf Summer glycyrrhizin high producing strain	76.478
DRR006526	Leaf Summer glycyrrhizin high producing strain	75.820

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	13.128
SRR2868004	Drought Stress (root)	8.366
SRR2967015	Control (root)	15.133

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	66.536
SRR9715740	Leaf	132.085
SRR9715741	Leaf	128.921
SRR9715739	Root	3.663
SRR9715742	Root	13.419
SRR9715743	Root	12.813

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	14.352
SRR8749028	MeJA induced 9h	40.791
SRR8749029	MeJA induced 9h	20.658
SRR8749030	Uninduced	21.346
SRR8749031	Uninduced	15.245
SRR8749032	Uninduced	29.117

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	18.230
SRR8400027	Control - Root	22.955