Gene detail information of Glyur000776s00026213 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G24400.1 | 7.00E-07 | SAUR-like auxin-responsive protein family |
| NR | XP_004510549.1 | 4.47E-44 | PREDICTED: auxin-induced protein 10A5-like [Cicer arietinum] |
| trEMBL | tr|G7L8D4|G7L8D4_MEDTR | 1.00E-40 | SAUR-like auxin-responsive family protein {ECO:0000313|EMBL:AET01855.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00776 | 58960 | 59304 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000776s00026213.1 | PF02519.9 | Auxin_inducible | 24 | 94 | 1.10E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.280 |
| SRR1783600 | control | 0.249 |
| SRR1783602 | moderate drought stress | 0.287 |
| SRR1811619 | moderate drought stress | 0.374 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.848 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.084 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.275 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.280 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.987 |
| SRR8749028 | MeJA induced 9h | 19.456 |
| SRR8749029 | MeJA induced 9h | 6.350 |
| SRR8749030 | Uninduced | 11.133 |
| SRR8749031 | Uninduced | 8.656 |
| SRR8749032 | Uninduced | 29.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.048 |
| SRR8400027 | Control - Root | 0.025 |