Gene detail information of Glyur000776s00026212 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G72430.1 | 3.00E-18 | SAUR-like auxin-responsive protein family |
| NR | AFK34109.1 | 5.08E-59 | unknown [Lotus japonicus] |
| trEMBL | tr|I3S1G7|I3S1G7_LOTJA | 2.00E-59 | Uncharacterized protein {ECO:0000313|EMBL:AFK34109.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00776 | 46592 | 46981 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000776s00026212.1 | PF02519.9 | Auxin_inducible | 12 | 106 | 3.70E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.336 |
| SRR1783600 | control | 13.467 |
| SRR1783602 | moderate drought stress | 136.472 |
| SRR1811619 | moderate drought stress | 141.494 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.741 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.585 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 211.599 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 200.771 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.159 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.624 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.809 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.489 |
| SRR2868004 | Drought Stress (root) | 6.377 |
| SRR2967015 | Control (root) | 11.962 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.112 |
| SRR9715740 | Leaf | 3.811 |
| SRR9715741 | Leaf | 1.205 |
| SRR9715739 | Root | 5.990 |
| SRR9715742 | Root | 5.540 |
| SRR9715743 | Root | 7.458 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.791 |
| SRR8749028 | MeJA induced 9h | 31.481 |
| SRR8749029 | MeJA induced 9h | 28.592 |
| SRR8749030 | Uninduced | 2.280 |
| SRR8749031 | Uninduced | 0.828 |
| SRR8749032 | Uninduced | 2.884 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.084 |
| SRR8400027 | Control - Root | 5.984 |