Gene detail

Gene detail information of Glyur000776s00026207

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G14205.1	Phosphoinositide phosphatase family protein
NR	XP_006598850.1	PREDICTED: phosphoinositide phosphatase SAC2-like isoform X2 [Glycine max]
Swissprot	tr\|Q94A27\|SAC2_ARATH	Phosphoinositide phosphatase SAC2
trEMBL	tr\|I1MK56\|I1MK56_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA16G01470.1}

Sequence

Transcript Sequence

>Glyur000776s00026207.1
AAAGCCCGAAATTTTTGTCTTTTTAAATTATTTTCCGCTTTGCATTTCTCATTAATATTATAAAAGTTTTTCATTTTTCATTTTCATTTTTGTGTGGATGCTGTGTTGTGGCCATAGCTGTGGCTTTCTTCTCTTCCCTGCTTCTCTGACAATCTCTCATATTAACTTCCTTTTCATCTCTGAAAAACCCAAAGAGGCTGCTTCTGCTTCTCCATTCCCCAAAACCACACACCTCCTTCTGATTCCTCAAAAAGCTGCTTTTTCTCTCTTTCTGATTTAGATTTCACCCTTGTTTGTTTTTCCATTTATTTTATTTACTTTTTTTAGATTTTGGGTGTCATTGTGTATGTAAAGAGAATTTTATGTGGACCATGAATGTAAAGTTTTGAGCTTTTTATTGTACTTGTTTTTGGGTGTGTTGTCTTCTAAAGAGCTTCTGTTTGANTCAAACAGAAGCTCTNTGTTGTTGTTTTTGAATTTTCTGCTAGTGATCTCGTTGGGAAAAAAACCCGAGCTTTTTTGGAGGCTCGGGATCTGANTTGTGATGGAGATGGCAAAGGAGAAGCTGCAGATTGCAGATGGAGCTGACCCCAAGTCCTGCTACATGCAAAAGTTCAGGCTCTATGAAACCCGCTCGAAATTCTATATGATTGGAAGAGACAAAAACAGAACATTTTGGAGGGTCTTAAAGATTGACAGATTGGAGTCATCTGAATTGAATATTATCGAAGATTCAACAGTATACTCAGAAACTGAGTGTTGTGATCTTCTAAGGCGGATACATGAAGGAAACAAGTCAACAGGGGGCCTTAAATTTGTAACAACTTGCTATGGAATCATTGGATTTATCAAATTTCTTGAGCCATACTACATGCTGCTTATAACAAAGCGAAGGAAGATTGGCACAATATGTGGGCACACTATATATGCAATCACAAAGAGCGAAATGATTCCAATTCCACATGCAAGTGTGCGATCCAAAATGGCATATTCTAAGGATGAGAACAGATACAAGAAGCTTCTATGCAGTGTGGATCTTACGAAGGACTTCTTTTATAGCTACTCGTACAACATCATGCGTAGTCTTCAAAAGAACTTATCTGATCATAATACTATGGGACAATCACTATATGAAACACTGTTTGTTTGGAATGAGTTCTTAACTCGTGGAATCAGGAATAATCTCCAGAATACTTCCTGGACAGTTGGCTTAGTTTATGGCTTTTTTAAACAGGTCAAACTTTCCATATCTGGCAGTGAGTTCAACTTAATTATCATTGCTAGGCGCTCAAGGCATTATGCAGGGACCAGATATTTGAAACGAGGAGTCAATGAAAAAGGTAGAGTAGCTAATGATGTTGAGACAGAGCAGATAGTCTTTGCAGATGCTAGTGATGGGTCCCCAATGCAAATCAGTTCTGTGGTGCAGATCCGGGGTTCCATCCCTCTATTCTGGTGTCAGGAAGCTTCTCCATTGAATATAAAACCTGACATTATATTATCAAGGAAGGACTATGGTTTTGAAGCCACAAGACTTCATTTTGAAAATCTTGTCAAGAGATATGGAAATCCAATTATTATATTGAACTTGATTAAGACACGTGAGAAGAGGCCCCGTGAAACTATTCTACGAGCCGAGTTTGCTAATGCTGTTAGATCTATTAATAAAAACTTGAGAGGTGAAAATCGCCTGAGGTTCCTTCATTGGGATCTGCATCGGCACTCAAGATGCAGCAAAGCTACCAATGTGTTGGCACAACTGGGAAAAGTGGCTGCATATGCATTGAAGCTAACTGGCATCTTCTACTGTCCAGTGACACCGAATTTGAGGCTAGATGGATTTTTCCAATATTCCTACTCTGATATAAACAANGATAATGTTGATAAGGAAACAGAAGCTAGCAATTGTTACTATAGTGGTAATGAGAACAAAGTTTACAGTGTCAAACCCCAGATGCTTCAAGCAGGGGTCTTGAGGACTAATTGCATAGACTGTTTAGACCGCACCAATGTTGCACAGTATGCTTATGGACTAGCTGCACTTGGACGTCAGCTACAAGTTCTAGGATTTACTGAGTCCCCGCATATCGATCTTGATAACCCTTTGGCAAAGGAATTGATGGCAGTCTATGAGTCCATGGGCGACACATTAGCTTTTCAATATGGGGGTTCTGCCGCACACAACAAGATATTTTCTGAAAGAAGAGGTCAATGGAAGGCAGCAGCACAATCCCAAGAATTTATTCGAACCCTACAGCGTTATTACAACAATACATATATGGATGCTGATAAACAGAAAGCAATTAACATATTCCTGGGGCATTTTCAGCCACAACAGGGAAAACCAGCACTGTGGGAGTTAGATTCGGATCAGCATTACACTGCTGGAAGACGTAGCCTAAATTTAGCAGATGGAAGTGTTAGGTCAACTATTAAAAGATCACTATCAGCTGGCAACATTCTCTGTGAAAATGACGCTCCAATTAGGAACTTAAATGCTACAGATTGTCAGCACTCGTCTGAAAAACCCGATAAGCAATGTCTTTTGGAGTCTAATCCAGACATCCTTACTTGTGGAAGTGCTATTTGTCATTGCAGGCAGTTATATGGACGAATGGTCAAGGACCAATTTTGTGATAGTGATCACATTTGTTATGATGAACATGGAGATGCATGTGACTGCTCCAATTTCCTTGATGTGGACTGGCTTTCTTCTTCTGGAAATTCTTGTGAAGAGGAATTACTTGAAAGGTCAACCAGCATCTCCTCAGAGAATATTGTGAATGAACTAATAACTGAGGCATCCGCAAGTGAATCTGAATCCAGCATGAAGGGGACACAGAGTGGAGGAGAACTCAACAAAGATGGCAAATATACTGATAGCTTTGAGCGCTGGGTGACTTGTGGTGAGATGCTTTTTGTTTGAGACTAGTAATGTCTCTTGACCCTTTATCTCACCCCATCCGAAGGATGTGGGGTCCTGACTTTGCTGTACAGAAATAAATGGTAACATATAATCCCAAAAGCAAATCAAATAGCAGTGGCAGTAGCTGAGAAGCTGATTATTTTTGTTCAAGGAGCATTTGAGTTACAGATGCAAAGTGTTCCCTTATAGTCCTGTCCAAGGNAGCATCATCACTTGGGGAGGTAGTGGTAGATGTCAATAGGTAATTATTTTTTGTGCCTCCCAAAGTAGATACATT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00776	11026	21792	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0007033 vacuole organization

GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process

molecular_function
GO:0042578 phosphoric ester hydrolase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000776s00026207.1	PF02383.13	Syja_N	95	398	6.50E-86

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	11.018
SRR1783600	control	11.236
SRR1783602	moderate drought stress	8.542
SRR1811619	moderate drought stress	8.715

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	15.865
DRR006520	Root Summer glycyrrhizin high producing strain	15.763
DRR006521	Root Winter glycyrrhizin high producing strain	21.241
DRR006522	Root Winter glycyrrhizin high producing strain	21.018
DRR006523	Root Summer glycyrrhizin low producing strain	25.001
DRR006524	Root Summer glycyrrhizin low producing strain	25.391
DRR006525	Leaf Summer glycyrrhizin high producing strain	21.528
DRR006526	Leaf Summer glycyrrhizin high producing strain	21.446

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	43.484
SRR2868004	Drought Stress (root)	69.311
SRR2967015	Control (root)	72.037

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	49.674
SRR9715740	Leaf	41.951
SRR9715741	Leaf	54.805
SRR9715739	Root	1.385
SRR9715742	Root	11.934
SRR9715743	Root	11.266

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	22.965
SRR8749028	MeJA induced 9h	115.284
SRR8749029	MeJA induced 9h	76.524
SRR8749030	Uninduced	82.762
SRR8749031	Uninduced	80.512
SRR8749032	Uninduced	78.808

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	36.598
SRR8400027	Control - Root	38.935