Gene detail

Gene detail information of Glyur000775s00025737

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G07990.1	2.00E-93	Cytochrome P450 superfamily protein
NR	XP_006579509.1	0	PREDICTED: flavonoid 3'-monooxygenase-like isoform X2 [Glycine max]
COG	YP_003950164.1	2.00E-26	cytochrome p450 [Stigmatella aurantiaca DW4/3-1]
Swissprot	tr\|Q9SBQ9\|F3PH_PETHY	5.00E-114	Flavonoid 3'-monooxygenase
trEMBL	tr\|V7AX70\|V7AX70_PHAVU	2.00E-136	Uncharacterized protein {ECO:0000313\|EMBL:ESW10242.1}

Sequence

Transcript Sequence

>Glyur000775s00025737.1
ATGTCTCCGTGGCTAATTGGCCTCGCCACCCTCGCTGCAGCGATCTTCATATACCGCCTCGTCAAGTTCGCGACGCGCCCTTCGCTCCCACTCCCGCCAGGCCCAAAACCGTGGCCCATTATAGGAAACATGCCACACCTGGGCCCAGTGCCGCACCACTCCATCGCGGACTTGGCCCGCACATACGGCCCATTGATGCACCTCAAATTGGGCTTCGTGGACGTCGTGGTGGCCGCTTCGGCCACCGTGGCGGAACAGTTCCTCAAGGTTCACGACGCCAATTTTAGTAGCCGGCCACCCAACGCCGGAGCGAAATACATCGCTTATAACTACCAGGATCTTGTTTTCGCTCCCTACGGCCCGCGGTGGCGTTCTCTCAGGAAAATCACCGCCGTTCATCTCTTCTCCGGCAAGGCCATGGATGAATTCAAACACTTACGTCAGAATATGTTTACAGCTGGAACAGACACNTCATCAAGCACCACAGAATGGGCCATCGCAGAACTGATCCGAAACCCAAGAATTCTGGCCCAAGTCCAACAAGAANTNGACACTGTTGTGGGCCTAGAGAGGAATGTGAAAGAAGAGGACTTGCCTCACTTGCCATACTTGCAAGCAGTGGTNAAGGAAACCTTNCGCCTACACCCATCAACCCCTCTTTCCCTCCCTCGGATTGCCGCTGAGAGCTGTGAGATATTTGGGTACCACATCCCGAAGGGTGCCACTCTCTTGGTGAATGTGTGGGCCATAGCGCGTGACCCAAANGAATGGACCGACCCATTGGAGTTCAAGCCCGAAAGGTTCCTACCGGGTGGTGAGAAGGCTGATGTGGATGTTAGGGGCACTGACTTTGAGGTAATACCCTTTGGGGCTGGGCGTAGAATATGTGCTGGAATGAACCTTGGGTTCCGAATGGTCCAACTCCTAACTGCGACCTTGGCCCATTCATTTAACTGGGAATTGGAAAATGGGCTCAACCCAGAAAAGTTGAACATGGATGAAGCATATGGACTCACCCTTCAACGGGCNGTGCCTCTGTCGGTGCACCCTAAGCCCAGGCTCTCGCCACATGTGTACTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00775	91296	95801	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP75B1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K05280	E1.14.13.21	EC:1.14.13.21	Flavonoid biosynthesis	map00941
			Flavone and flavonol biosynthesis	map00944

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000775s00025737.1	PF00067.17	p450	32	143	1.30E-16
Glyur000775s00025737.1	PF00067.17	p450	141	334	7.20E-62

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	17.950
SRR1783600	control	16.066
SRR1783602	moderate drought stress	3.396
SRR1811619	moderate drought stress	3.494

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.200
DRR006520	Root Summer glycyrrhizin high producing strain	0.249
DRR006521	Root Winter glycyrrhizin high producing strain	2.491
DRR006522	Root Winter glycyrrhizin high producing strain	2.411
DRR006523	Root Summer glycyrrhizin low producing strain	1.325
DRR006524	Root Summer glycyrrhizin low producing strain	1.529
DRR006525	Leaf Summer glycyrrhizin high producing strain	68.147
DRR006526	Leaf Summer glycyrrhizin high producing strain	70.327

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	61.797
SRR2868004	Drought Stress (root)	168.852
SRR2967015	Control (root)	209.308

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	99.109
SRR9715740	Leaf	34.006
SRR9715741	Leaf	38.047
SRR9715739	Root	23.437
SRR9715742	Root	14.058
SRR9715743	Root	16.065

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.755
SRR8749028	MeJA induced 9h	10.907
SRR8749029	MeJA induced 9h	2.924
SRR8749030	Uninduced	22.105
SRR8749031	Uninduced	15.614
SRR8749032	Uninduced	9.634

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	60.048
SRR8400027	Control - Root	42.699