Gene detail

Gene detail information of Glyur000775s00025736.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G07990.1	4.00E-177	Cytochrome P450 superfamily protein
NR	KEH33153.1	0	flavonoid hydroxylase [Medicago truncatula]
COG	YP_003950164.1	7.00E-36	cytochrome p450 [Stigmatella aurantiaca DW4/3-1]
Swissprot	tr\|Q9SD85\|F3PH_ARATH	0	Flavonoid 3'-monooxygenase
trEMBL	tr\|A0A072UVP1\|A0A072UVP1_MEDTR	0	Flavonoid hydroxylase {ECO:0000313\|EMBL:KEH33153.1}

Sequence

Transcript Sequence

>Glyur000775s00025736.1
ATGTCTCCATGGCTAATTGGCCTTGCCACTCTCACAGCAGCGATCTTCATATACCGCCTCGTGAAGTTCGCAACACGCCCTTCCCTCCCACTTCCGCCGGGCCCAAAACCATGGCCCATAATAGGGAACTTGCCACACCTGGGCCCGTTTCCACACCACTCCATCGCGGCCTTGGCCCACACATACGGCCCGCTGATGCACCTCAAGTTGGGCTTCGTGGACGTGGTGGTGGCCGCTTCGGCCTCCGTGGCGAAACAGTTCCTCAAGGCACATGACGCCAATTTCAGTAGCCGGCCACCCACCGCCGGAACGAAATACATCGCAAACTTTCAGGACCTCGTGTTTGCTCCCTACGGCCCACGGTGGCGCTCTCTCCGGAAAATCACCACCGTTCACCTCTTATCCGGCAAGGCCATGGATGAATCCAAACACTTGCGTCAGGAAGAGGTAGCAAGATTGACACGCAACTTGGCAAGTTCAGACTCAAAAGCTGTGAACTTGGGACAACAAATCAATGTGTGCACCACCAATGCACTGGCCAGGGCAATGATAGGGCGGAGAGTGTTCGACGATGGCAATGGTGGTTGTGACCCTAGAGCTAATGAGTTTAAGGACATGGTGGTGGAGTTGATGGTGTTAGGTGGGGTTTTTAACATTAGTGACTTTATTCCCCAATTGGCGTGGCTAGACCTTCAAGGGGTGCAAGGCAAATTGATAAAGTTACACAATAGGTTTGATGCATTTTTTACCAGCATTATTGAGGAACACAGGAGCTCTATTTCTAAGGGTGAGAAGCATAAGGATTTGTTGACAGCGTTGTTGTCGCATATAGATGTCCCCGATGAAAATGGCCACAAACTCAGCGAATTCGAGATCAGAGGACTTCTTCTGAACATGTTTGCAGGTGGGACAGACACATCATCAAGCACCACAGAATGGGTTATTGCAGAACTGATTCGTAACCCAAGAATTATGGCTCAAGTCCTACATGAATTGGACACTGTCGTGGGCCGAGAGAGGAGTGTTAAAGAAGAGGACTTGCCTCACTTGCCATACTTGCAAGCAGTGGTGAAGGAAACCTTCCGCCTACACCCACCAACCCCACTTTCCCTCCCACGGATTGCTGCAGAGAGTTGTGAGATATTTGGGTACCATATCCCAAAGGGTGCCACTCTCTTGGTGAATGTNTGGGCCATAGCGCGTGACCCAAAAGAATGGACCAACCCATTGGAGTTCAAGCCCGAAAGGTTCCTACCGGGTGGTGAGAAGGNTAGTGTGGATGTTAGGGGCAATGACTTTGAGGTGATACCCTTTGGCGCTGGGCGCAGAATATGTTCTGGGGTAAGTCTTGGGTTCCGAATGGTCCATTTCCTAGCTGCNACCTTGGCCCATTCATTTAACTGGGAATTGGAAAATGGGCTCAACCCAGAAAAAATGAACATGGATGAAGCATATGGGCTTACCCTGCAACGAGCCGTGCCTCTATTGGTGCACCCTAAGCCCAGACTCCCACCACATGTGTACTCATCGTCTTTNTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00775	79471	85327	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP75B1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K05280	E1.14.13.21	EC:1.14.13.21	Flavonoid biosynthesis	map00941
			Flavone and flavonol biosynthesis	map00944

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000775s00025736.1	PF00067.17	p450	32	486	2.10E-102

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	182.187
SRR1783600	control	184.333
SRR1783602	moderate drought stress	268.227
SRR1811619	moderate drought stress	267.115

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.023
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.018
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.289
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.323

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	54.224
SRR2868004	Drought Stress (root)	184.145
SRR2967015	Control (root)	162.719

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.264
SRR9715740	Leaf	0.249
SRR9715741	Leaf	0.981
SRR9715739	Root	387.186
SRR9715742	Root	144.491
SRR9715743	Root	189.969

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.103
SRR8749028	MeJA induced 9h	0.134
SRR8749029	MeJA induced 9h	0.040
SRR8749030	Uninduced	0.032
SRR8749031	Uninduced	0.173
SRR8749032	Uninduced	0.407

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	231.153
SRR8400027	Control - Root	153.114