Gene detail information of Glyur000775s00025734.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G07990.1 | 2.00E-57 | Cytochrome P450 superfamily protein |
| NR | AAO47849.1 | 2.66E-82 | flavonoid 3'-hydroxylase [Glycine max] |
| COG | YP_003177245.1 | 4.00E-14 | cytochrome P450 [Halomicrobium mukohataei DSM 12286] |
| Swissprot | tr|Q9SD85|F3PH_ARATH | 3.00E-68 | Flavonoid 3'-monooxygenase |
| trEMBL | tr|Q84U83|Q84U83_SOYBN | 1.00E-82 | Flavonoid 3'-hydroxylase {ECO:0000313|EMBL:AAO47849.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00775 | 70275 | 70697 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP75B1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K05280 | E1.14.13.21 | EC:1.14.13.21 | Flavonoid biosynthesis | map00941 |
| Flavone and flavonol biosynthesis | map00944 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000775s00025734.1 | PF00067.17 | p450 | 5 | 111 | 1.80E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.366 |
| SRR1783600 | control | 32.842 |
| SRR1783602 | moderate drought stress | 10.395 |
| SRR1811619 | moderate drought stress | 10.689 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.131 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.131 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.062 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.112 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 36.668 |
| SRR2868004 | Drought Stress (root) | 137.039 |
| SRR2967015 | Control (root) | 58.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.124 |
| SRR9715740 | Leaf | 0.399 |
| SRR9715741 | Leaf | 0.163 |
| SRR9715739 | Root | 103.965 |
| SRR9715742 | Root | 45.539 |
| SRR9715743 | Root | 55.798 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.532 |
| SRR8749028 | MeJA induced 9h | 0.641 |
| SRR8749029 | MeJA induced 9h | 0.168 |
| SRR8749030 | Uninduced | 0.552 |
| SRR8749031 | Uninduced | 1.294 |
| SRR8749032 | Uninduced | 1.893 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 65.897 |
| SRR8400027 | Control - Root | 40.002 |