Gene detail information of Glyur000775s00025728 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G29670.1 | 3.00E-150 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| NR | XP_004497726.1 | 0 | PREDICTED: GDSL esterase/lipase At1g29670-like [Cicer arietinum] |
| COG | YP_007095445.1 | 1.00E-18 | phospholipase/lecithinase/hemolysin [Chamaesiphon minutus PCC 6605] |
| Swissprot | tr|Q9C7N4|GDL15_ARATH | 0 | GDSL esterase/lipase At1g29670 (Precursor) |
| trEMBL | tr|A0A072UU26|A0A072UU26_MEDTR | 0 | GDSL-like lipase/acylhydrolase {ECO:0000313|EMBL:KEH33152.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00775 | 39277 | 42039 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000775s00025728.1 | PF00657.17 | Lipase_GDSL | 56 | 365 | 3.40E-44 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.089 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.087 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.938 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.916 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.051 |
| SRR2967015 | Control (root) | 0.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.602 |
| SRR9715740 | Leaf | 0.813 |
| SRR9715741 | Leaf | 1.227 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.474 |
| SRR9715743 | Root | 0.736 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.041 |
| SRR8400027 | Control - Root | 0.856 |