Gene detail information of Glyur000775s00025726 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G61150.2 | 1.00E-70 | leo1-like family protein |
| NR | XP_006582010.1 | 0 | PREDICTED: RNA polymerase-associated protein LEO1-like [Glycine max] |
| trEMBL | tr|I1KCZ9|I1KCZ9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G21900.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00775 | 23052 | 32009 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000775s00025726.1 | PF04004.8 | Leo1 | 278 | 334 | 5.60E-11 |
| Glyur000775s00025726.1 | PF04004.8 | Leo1 | 336 | 396 | 6.50E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 56.197 |
| SRR1783600 | control | 56.478 |
| SRR1783602 | moderate drought stress | 99.197 |
| SRR1811619 | moderate drought stress | 99.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 62.724 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 61.595 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 171.726 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 166.273 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 90.482 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 90.599 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 33.827 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 33.702 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 65.613 |
| SRR2868004 | Drought Stress (root) | 83.113 |
| SRR2967015 | Control (root) | 91.969 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 35.135 |
| SRR9715740 | Leaf | 41.513 |
| SRR9715741 | Leaf | 40.761 |
| SRR9715739 | Root | 5.319 |
| SRR9715742 | Root | 46.654 |
| SRR9715743 | Root | 38.956 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 57.400 |
| SRR8749028 | MeJA induced 9h | 107.530 |
| SRR8749029 | MeJA induced 9h | 81.534 |
| SRR8749030 | Uninduced | 125.981 |
| SRR8749031 | Uninduced | 143.661 |
| SRR8749032 | Uninduced | 144.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 77.985 |
| SRR8400027 | Control - Root | 78.028 |