Gene detail

Gene detail information of Glyur000774s00027680

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G13490.2	2.00E-154	ADP/ATP carrier 2
NR	CAA05979.1	0	adenine nucleotide translocator [Lupinus albus]
Swissprot	tr\|O22342\|ADT1_GOSHI	0	ADP,ATP carrier protein 1, mitochondrial (Precursor)
trEMBL	tr\|O49875\|O49875_LUPAL	0	Adenine nucleotide translocator {ECO:0000313\|EMBL:CAA05979.1}

Sequence

Transcript Sequence

>Glyur000774s00027680.1
GCCACCCACACTCCATTTCCTAGGTAAGTCACCATGGTTGATCAGGTTCAGCGCCCAAGAATCATTGAGAATGTTGCAGGCCAGCTCCATCTCCGATCTGGTCTTTCTTTGTACCATAAGAGGTCATTCGGGAATTACTCAAATGCTGCATTGCAGTATCCAATGATGCCAGCATGGAGGGCTACAACTGATTTTTCCACCATTGCAACAACAACACCACCCTCCTCTCCTGTCTTTGCTGCATCTCCTGCAGAGAAAGGACACTTTCTTATTGACTTTCTCATGGGTGGAGTTTCAGCTGCTGTATCCAAAACTGCTGCTGCTCCCATTGAAAGGGTCAAGCTCTTGATCCAGAACCAGGATGAGATGATTAAAGCTGGTAGACTTTCTGAGCCCTATAAGGGTATTAGTGATTGTTTTAAGAGAACAGTGGCGGAGGAGGGTATGGTTTCCCTATGGAGAGGTAACACTGCAAATGTCATCCGTTATTTCCCCACTCAGGCTTTGAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAATTTCAAGAAGGACAAGGATGGTTACTGGAAATGGTTTGCAGGCAACTTGGCCTCAGGAGGTGCTGCTGGTGCCTCGTCCCTTCTGTTTGTCTACTCCCTCGACTATGCTCGTACCCGTCTGGCCAATGATGCAAAGGCTGCAAAGAAGGGTGGAGAGAGGCAATTCAATGGTCTTGTTGATGTCTACAAGAAGACATTGGCAACTGATGGTGTTGCTGGCCTTTACCGTGGCTTCAACATTTCCTGTGTTGGAATCATTGTGTACCGCGGTCTCTACTTTGGAATGTATGATTCCCTGAAGCCAGTCCTCCTTACTGGATCTTTGCAGGATAGCTTCTTTGCTAGCTTTGGCCTTGGATGGCTCATCACCAATGGTGCAGGCCTAGCATCTTACCCAATTGACACTGTTAGAAGAAGAATGATGATGACCTCTGGGGAAGCTGTCAAGTACAAGAGCTCCATGGATGCATTTACACAAATCCTCAAGAACGAGGGTGCCAAGTCCTTGTTCAAGGGAGCTGGTGCTAACATCCTCCGTGCCGTTGCTGGTGCTGGTGTGCTTGCTGGTTATGACAAGTTGCAGGTGATAGTGTTTGGGAAGAAGTACGGATCCGGTGGAGCT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00774	80970	84059	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006810 transport

GO:0055085 transmembrane transport

cellular_component
GO:0005743 mitochondrial inner membrane

molecular_function
GO:0005215 transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000774s00027680.1	PF00153.22	Mito_carr	76	173	2.40E-24
Glyur000774s00027680.1	PF00153.22	Mito_carr	181	275	1.20E-20
Glyur000774s00027680.1	PF00153.22	Mito_carr	281	367	1.20E-15

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.328
SRR1783600	control	0.373
SRR1783602	moderate drought stress	0.560
SRR1811619	moderate drought stress	0.617

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.371
DRR006520	Root Summer glycyrrhizin high producing strain	0.275
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.094
DRR006524	Root Summer glycyrrhizin low producing strain	0.094
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.341
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.533

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	49.539
SRR2868004	Drought Stress (root)	18.018
SRR2967015	Control (root)	19.277

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.625
SRR9715740	Leaf	2.306
SRR9715741	Leaf	2.602
SRR9715739	Root	2.327
SRR9715742	Root	3.031
SRR9715743	Root	2.305

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.258
SRR8749028	MeJA induced 9h	0.685
SRR8749029	MeJA induced 9h	0.603
SRR8749030	Uninduced	0.314
SRR8749031	Uninduced	0.120
SRR8749032	Uninduced	0.044

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.541
SRR8400027	Control - Root	1.357