Gene detail

Gene detail information of Glyur000773s00021471

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G66960.1	0	Prolyl oligopeptidase family protein
NR	XP_004509189.1	0	PREDICTED: protease 2-like [Cicer arietinum]
COG	YP_007100077.1	2.00E-100	protease II [Chamaesiphon minutus PCC 6605]
trEMBL	tr\|A0A072TUH3\|A0A072TUH3_MEDTR	0	Prolyl oligopeptidase family protein {ECO:0000313\|EMBL:KEH20478.1}

Sequence

Transcript Sequence

>Glyur000773s00021471.1
ATGCACCGTCTATTTCGTTTCCCGGCCGTCACCCGCCGCAAGGACCTGCTGGGGCGGCACTACAAGGCGGCGAAGGCACCGCCTCCGGCGACCCCTCCAAAGGCACCAAAGAAGCCTCAGAAGTTCAGCTTCCACGGGGTGACATGGGAGGACCCGTACAGCTGGATGTCGAACCTGAGCGACAAGGTAGCGATGCGGCACATGGACGTGTACATGGAGGCAGAGGAGAAGTACACGGAGGCCGTCATGTCCGACTCAGAGCGCCTCCTCAACAAGCTCCACTTCGAAATGGCCTCCCGCATCCCCTTCGACCTCTCCACTCCTCCCCTTCGCTGGGGCCCTTGGATCTATTATCGTCGTGTTGAAGAAGGAAAACCTTACCCGGTGCTTTGTAGAAGATTGGCCAGCTTGAACGACGATTTCATATCGCATAAGTATCCTCCTGCAGGGTTCGATTTCACGACCGGGAAGACAATTGAGAAGAAGCTCGTTGACTATAATCAAGAGGCAGAGAGATTCGGAGGTTATGCTTATGAGGAGCTTTCTGAGGTTTCGCCCAACCATCAGTTTCTTGCTTACACTATGTATGATAAAGACAAGGGCTACTTCAAGTTATCTGTGAGAAATTTGAATTCCGGTTCTTTGTGCAGTAAGCCACAGGCAGATCGGGTCTCAAACTTGGCATGGGCCAAAGATGGCCAGGCGTTGCTTTATGTTGTGACTGATCAGAATATGAGGCCATACCGGATCTACTACAGTCTTATTGGATCAACTGATCAAGATGTTTTGCTTTTGGAAGAATCAGATGAAAATGTTCACATTAGTATAAGGCACACAAAAGACTTTCAATTTGTTACTGTGAATACATTGTCTCCTACATCATCAAAGGTCTTTCTAATAAATGCAGCTGATCCATTGTCTGGCTTGAAACTAGTTTGGGAGTGTGATGCTATAGCTCACTGCATAATTGAACACCACCAAGGTTATCTTTATTTATTCACAGATGCTCCCAAAGGCGGACAATCAGTTGATTATCATTATCTTCTTTGTAGTCCAGAGGATGCTCCTTCAAATCCAAGAAAATGGGAGGAGGTATTTGTCGATGACCCAGATTTTATTATTGAGGATGTTGACTTTAGCGATAAATACTTAGCACTAATTGTGAGGGAAGGTCGAAATTTTCAACTTTGTTCAGTTGGATTGCCATTGCCCTTCGGGAAGGGGGCAGTTAAACTGAGGAAGCTGGACCTAAAGTACTTGTCTCTTCCAAAGCATGTTTGTCAAATTTCACCTGGGCCAAATTATGACTTTTTCTCATCAGTCATGCGCTTTATAATATCATCTCCTGTGATGCCTGATGCTGTGGTTGATTATGACCTAGCAACTAGTAGGTGGAACATCATTCAACAGCAAAACATGCTTCATGACAGAACACGGATATTATATGGTACAAATTCTGCTAGTATTAGCATGGAATCCTCAAATTCAAAATACTCCAGTCCTGTGAATGCCAACTTAGAAGATGACCACTCATGGAATGACCTGTCTGAGTTTTATGCCTGTGAACAGTATGATGTACCATCATATGATGGAGTTCTGATTCCTTTGACTATTGTATTTGCACGTAACAATAAGCCAGGGGATAAAAAACCTGGGATATTGCATGGGCATGGAGCTTATGGTGAGTTACTCGACAAACGGTGGCGCAGTGAATTTAAAAGCCTCCTGGATCGTGGTTGGGTCATAGCCTATGCTGATGTTAGAGGTGGAGGTGGTTATGGTAAGAAATGGCATCATGATGGGAGACGAACAAAGAAGCATAATTCAATCGATGATTACATCTCTTGTGCTAAGTTCCTCATTGATAAAGATATTGTGCATGAAAACAAATTGGCTGGTTGGGGATATAGTGCTGGAGGGCTTTTGGTTGCTGCAGCTATTAATCGTTCTCCAGATTTATTTCGTGCTGCCATCTTAAAGGTTCCTTTTTTAGATGCAACCAACACTCTTCTGTATCCCATCTTACCACTCATAGCTGTTGATTATGAAGAGTTTGGCTACCCTGGGGATCTTGATGATTTTCTTGCAATTCGAGAATATGCTCCATATGACAATATTCAAAAGGATGTTCTCTATCCAGCGGTATTAGTAACCTCATCTTTCAATACACGATTTGGAGTGTGGGAAGCAGCAAAATGGGTAGCACGAGTTCGTGATCTTTCAATTTATGACCCAAAACGGCCAATATTGCTGAATTTGACCACAGATATAGTGGAGGAAAACCGTTATTTGCAGTCCAAGGAATCAGCACTAGAGGCTGCGTTTCTCATTAAGATGATGGAATCTTAGATATGCCAACTGATCAAATTTGCTCATTCGAAATATAGTTGGCACTTGTGAGATGCCTCCATATGGCAATCTGATATAAAAATTGAAAATGTGCTTTTGGATGAACCAAGATCCATCCAATCAGGTGCTCTGCATGGGAAATACTTGCCAGTCAATATTCTTTTTCCAATTGGTTGCACACTCTAAATGGGTACTGTGCTAAAACAATCAACAGAATTGACACTAGAGCCTTTGCTGTAACATGCACGGACAGGACCTTGGTCGCTTTCTTGTAAGAATTTGGAGTTCATTATATGTAAATGTCACTGCCTTGTGGATTAGTGAGTGTTTGGGCGGGTGGTTTTTGCAGATTACGGGTCGTTTAGCATCATGGTTCTTTTATCCCCACGTTCGAAAGCCACATGATCCATAGTCTCCAAATCGTGGATGTGTTAAGTTTTC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00773	107000	111910	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function

GO:0004252 serine-type endopeptidase activity

GO:0008236 serine-type peptidase activity

GO:0070008 serine-type exopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000773s00021471.1	PF02897.10	Peptidase_S9_N	33	392	2.50E-38
Glyur000773s00021471.1	PF00326.16	Peptidase_S9	568	744	4.60E-40

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.624
SRR1783600	control	1.605
SRR1783602	moderate drought stress	3.266
SRR1811619	moderate drought stress	3.314

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.538
DRR006520	Root Summer glycyrrhizin high producing strain	2.645
DRR006521	Root Winter glycyrrhizin high producing strain	5.521
DRR006522	Root Winter glycyrrhizin high producing strain	5.348
DRR006523	Root Summer glycyrrhizin low producing strain	3.289
DRR006524	Root Summer glycyrrhizin low producing strain	3.505
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.636
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.678

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	3.750
SRR2868004	Drought Stress (root)	2.839
SRR2967015	Control (root)	3.273

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.194
SRR9715740	Leaf	2.184
SRR9715741	Leaf	1.902
SRR9715739	Root	0.692
SRR9715742	Root	2.118
SRR9715743	Root	2.098

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.746
SRR8749028	MeJA induced 9h	3.209
SRR8749029	MeJA induced 9h	2.881
SRR8749030	Uninduced	0.234
SRR8749031	Uninduced	0.151
SRR8749032	Uninduced	0.476

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.860
SRR8400027	Control - Root	2.965