Gene detail information of Glyur000773s00021466


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G50380.10Protein of unknown function (DUF1162)
NRKEH20474.10DUF1162 family protein [Medicago truncatula]
trEMBLtr|A0A072TSJ6|A0A072TSJ6_MEDTR0DUF1162 family protein {ECO:0000313|EMBL:KEH20474.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold007736428797574-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000773s00021466.1PF06650.7DUF1162225324994.40E-28
Glyur000773s00021466.2PF06650.7DUF1162225324841.60E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.809
SRR1783600control10.862
SRR1783602moderate drought stress14.429
SRR1811619moderate drought stress14.242

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.266
DRR006520Root Summer glycyrrhizin high producing strain8.187
DRR006521Root Winter glycyrrhizin high producing strain27.292
DRR006522Root Winter glycyrrhizin high producing strain26.666
DRR006523Root Summer glycyrrhizin low producing strain8.712
DRR006524Root Summer glycyrrhizin low producing strain8.728
DRR006525Leaf Summer glycyrrhizin high producing strain5.899
DRR006526Leaf Summer glycyrrhizin high producing strain6.001

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)12.052
SRR2868004Drought Stress (root)15.767
SRR2967015Control (root)13.835

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf5.535
SRR9715740Leaf7.946
SRR9715741Leaf7.283
SRR9715739Root1.135
SRR9715742Root14.368
SRR9715743Root12.325

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.819
SRR8749028MeJA induced 9h9.127
SRR8749029MeJA induced 9h5.042
SRR8749030Uninduced6.315
SRR8749031Uninduced5.704
SRR8749032Uninduced5.335

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root15.851
SRR8400027Control - Root17.662