Gene detail information of Glyur000773s00021456 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G50810.1 | 8.00E-07 | Uncharacterised protein family (UPF0497) |
| NR | AFK37863.1 | 5.52E-18 | unknown [Lotus japonicus] |
| Swissprot | tr|P0DI71|CSPL3_GINBI | 2.00E-08 | CASP-like protein 5B1 |
| trEMBL | tr|I3SC71|I3SC71_LOTJA | 2.00E-18 | CASP-like protein {ECO:0000256|RuleBase:RU361233} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00773 | 26192 | 29624 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.265 |
| SRR1783600 | control | 7.728 |
| SRR1783602 | moderate drought stress | 12.460 |
| SRR1811619 | moderate drought stress | 11.401 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.904 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.583 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.783 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.152 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.391 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.815 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.578 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.987 |
| SRR2868004 | Drought Stress (root) | 29.025 |
| SRR2967015 | Control (root) | 30.606 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.140 |
| SRR9715740 | Leaf | 16.429 |
| SRR9715741 | Leaf | 18.493 |
| SRR9715739 | Root | 7.998 |
| SRR9715742 | Root | 15.008 |
| SRR9715743 | Root | 11.504 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.595 |
| SRR8749028 | MeJA induced 9h | 2.957 |
| SRR8749029 | MeJA induced 9h | 3.062 |
| SRR8749030 | Uninduced | 4.257 |
| SRR8749031 | Uninduced | 1.794 |
| SRR8749032 | Uninduced | 2.025 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 41.094 |
| SRR8400027 | Control - Root | 43.738 |