Gene detail information of Glyur000773s00021455 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G23690.1 | 1.00E-27 | |
| NR | XP_004509221.1 | 2.45E-70 | PREDICTED: uncharacterized protein LOC101502801 [Cicer arietinum] |
| trEMBL | tr|I1MNJ8|I1MNJ8_SOYBN | 3.00E-60 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G25840.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00773 | 21614 | 22141 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000773s00021455.1 | PF14009.1 | DUF4228 | 1 | 175 | 2.60E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.295 |
| SRR1783600 | control | 17.231 |
| SRR1783602 | moderate drought stress | 37.041 |
| SRR1811619 | moderate drought stress | 37.364 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 204.003 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 207.419 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.759 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.287 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 155.805 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 154.818 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.335 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.364 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.021 |
| SRR2868004 | Drought Stress (root) | 15.065 |
| SRR2967015 | Control (root) | 50.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 72.574 |
| SRR9715740 | Leaf | 108.178 |
| SRR9715741 | Leaf | 106.024 |
| SRR9715739 | Root | 712.829 |
| SRR9715742 | Root | 496.034 |
| SRR9715743 | Root | 512.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 247.948 |
| SRR8749028 | MeJA induced 9h | 142.436 |
| SRR8749029 | MeJA induced 9h | 215.393 |
| SRR8749030 | Uninduced | 10.362 |
| SRR8749031 | Uninduced | 7.523 |
| SRR8749032 | Uninduced | 69.644 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.615 |
| SRR8400027 | Control - Root | 68.086 |