Gene detail

Gene detail information of Glyur000772s00033983

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G54160.1	2.00E-89	O-methyltransferase 1
NR	KHN06374.1	1.18E-168	Anthranilate N-methyltransferase [Glycine soja]
COG	YP_007130428.1	2.00E-35	O-demethylpuromycin O-methyltransferase [Gloeocapsa sp. PCC 7428]
Swissprot	tr\|A9X7L0\|ANMT_RUTGR	1.00E-124	Anthranilate N-methyltransferase
trEMBL	tr\|V7AP24\|V7AP24_PHAVU	1.00E-153	Uncharacterized protein {ECO:0000313\|EMBL:ESW07324.1}

Sequence

Transcript Sequence

>Glyur000772s00033983.1
AGCTTTAGGGCAATACATTATAGAACACCTATCTAATTGGTTTGTCTCTAGCATTTAAATCTTATTATGGCTTATTCATTAGAAACCAATGGCAGTGATGCGAATCNCCTTACAAGAGAAGAAGAAGATGACTTCGTTTTTGCTAATCACGTCTCGTCTTCTTTCATGCTTCCATTNACGGTTCGGTCTGCAATTGAGCTAGGCATCTTTGACCTCTTAGCCAATGCAGGGGAAGGTGTCAAGCTTTCTGCAGAGGACATAGCTGTTAAGATTGGGTCGAAGAACCCAAGAGCTCCTGCAATGTTGGACCGTCTTTTGAGATTATTGGCTAGTCACTCCATGCTGCATTGCTCACTTTNTGAAGATCAACAACAATGTGCATCTCCTAAGAAGCTCTACTCCCTCGCCCCTGCCTCCAAGTATTTTGTGACCGATCCTAATGGTGTCTCATGGGGACCTCTTTTGAACTTCTCTCTAGACAAGGTCATGCTGGAACCCTGGACTGGACTGAAAGGAGCAATCATGGAAGCCGAAGGAGGTTCACCATTCAACAGGGTTCATGGCCTCATGCATGGATATGAGTATGCAGGTTTGGATCCCAAGTTCAATAATGTTGTCAACGAAGCTATGGTCAACTTGACCACTATGGTCATGAAGAGGATTCTTGAGTTCTACCAAGGTTTTGAGAACATCAACATACTAGTGGACGTTGGTGGTGGCCTTGGGATCAATCTCAAGTTTATTACTTCCAAATATCCTGATATAAAGGGTGTTAATTTTGACTTGCCTCATGTCTTAGAGAATGCCCCTGCCTATGCCGGAGATATGTTTGAGAGTGTTCCGAATGGAGATGTCATTTTCCTGAAGTCTATACTTCACAATTGGGATGATGAAGAATGTTTGAAGTTGTTGAAGAATTGTCGTAAAGCTATTCCTGATGATGGGAAAGTTATTGTTGTGGAGTCAGTTCTTCCTATTTTGCCTGAGAGTACAATTGTTGCTAAGAATGATGCCTGCCTTGACATCATGATGATGACTCAACTCCCAGGAGGAAAAGAGCGAACCCAAAATGAATTCACGGAATTGGCACTAAGAGCTGGATTTAGCGGCATCAAATTCGTTTGTTGTATCTCTGGCTCTTGGGTTATGGAGATCTTCAAGTAGACATATATTTATGGGTACCTAACATGGCTCATACTGTTCTTCTATCATCTATCATTGCATTGTAATAATCACTTTTATACACTATATGCTACATAATTAATAAAGAATCTACTACGGTTGGGCATGAAATCGAAACATGGAAGAGTGTGTGTGTGTGTGTTTTTTTTCCTGTCTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00772	18066	22069	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K13066	E2.1.1.68, COMT	EC:2.1.1.68	Phenylpropanoid biosynthesis	map00940

Gene Ontology

molecular_function

GO:0008168 methyltransferase activity

GO:0008171 O-methyltransferase activity

GO:0046983 protein dimerization activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000772s00033983.1	PF08100.6	Dimerisation	39	88	2.70E-16
Glyur000772s00033983.1	PF00891.13	Methyltransf_2	108	341	8.50E-74

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	119.420
SRR1783600	control	119.715
SRR1783602	moderate drought stress	79.509
SRR1811619	moderate drought stress	77.905

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.160
DRR006520	Root Summer glycyrrhizin high producing strain	0.160
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.431
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.478

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.949
SRR2868004	Drought Stress (root)	6.667
SRR2967015	Control (root)	2.073

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.507
SRR9715740	Leaf	0.513
SRR9715741	Leaf	1.167
SRR9715739	Root	176.538
SRR9715742	Root	103.910
SRR9715743	Root	112.062

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	142.895
SRR8400027	Control - Root	83.777