Gene detail information of Glyur000770s00019680 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G16240.1 | 5.00E-94 | delta tonoplast integral protein |
| NR | XP_006584589.1 | 4.24E-156 | PREDICTED: uncharacterized protein LOC100803901 isoform X1 [Glycine max] |
| COG | YP_007100376.1 | 5.00E-40 | MIP family channel protein [Chroococcidiopsis thermalis PCC 7203] |
| Swissprot | tr|Q41951|TIP21_ARATH | 3.00E-142 | Aquaporin TIP2-1, N-terminally processed |
| trEMBL | tr|I1KV43|I1KV43_SOYBN | 2.00E-156 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G21730.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00770 | 84190 | 85961 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000770s00019680.1 | PF00230.15 | MIP | 15 | 232 | 6.20E-77 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.000 |
| SRR1783600 | control | 1.059 |
| SRR1783602 | moderate drought stress | 1.575 |
| SRR1811619 | moderate drought stress | 1.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.134 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.226 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.282 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.270 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.295 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.246 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 142.218 |
| SRR2868004 | Drought Stress (root) | 115.451 |
| SRR2967015 | Control (root) | 76.889 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 40.303 |
| SRR9715740 | Leaf | 8.097 |
| SRR9715741 | Leaf | 13.399 |
| SRR9715739 | Root | 7.898 |
| SRR9715742 | Root | 7.680 |
| SRR9715743 | Root | 6.949 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.089 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 38.551 |
| SRR8400027 | Control - Root | 47.236 |