Gene detail information of Glyur000770s00019671 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38600.1 | 2.00E-85 | HAD superfamily, subfamily IIIB acid phosphatase |
| NR | KEH18204.1 | 1.35E-146 | plant acid phosphatase [Medicago truncatula] |
| COG | YP_005845138.1 | 6.00E-26 | Class B acid phosphatase [Ignavibacterium album JCM 16511] |
| Swissprot | tr|P27061|PPA1_SOLLC | 6.00E-60 | Acid phosphatase 1 (Precursor) |
| trEMBL | tr|A0A072TL09|A0A072TL09_MEDTR | 5.00E-147 | Plant acid phosphatase {ECO:0000313|EMBL:KEH18204.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00770 | 38788 | 40032 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000770s00019671.1 | PF03767.9 | Acid_phosphat_B | 36 | 255 | 9.00E-66 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.275 |
| SRR1783600 | control | 0.292 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.473 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.411 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.364 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.662 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.240 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.005 |
| SRR2868004 | Drought Stress (root) | 10.689 |
| SRR2967015 | Control (root) | 1.998 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.043 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.151 |
| SRR9715739 | Root | 0.167 |
| SRR9715742 | Root | 0.661 |
| SRR9715743 | Root | 0.643 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.058 |
| SRR8400027 | Control - Root | 0.333 |