Gene detail

Gene detail information of Glyur000768s00019889

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G49880.1	4.00E-66	Erv1/Alr family protein
NR	XP_004511174.1	1.29E-116	PREDICTED: FAD-linked sulfhydryl oxidase ERV1-like [Cicer arietinum]
Swissprot	tr\|Q8GXX0\|ERV1_ARATH	2.00E-85	FAD-linked sulfhydryl oxidase ERV1
trEMBL	tr\|V7CHD3\|V7CHD3_PHAVU	2.00E-114	Sulfhydryl oxidase {ECO:0000256\|RuleBase:RU371123}

Sequence

Transcript Sequence

>Glyur000768s00019889.1
CTCGAATCCTTGCTCGCCTGTTTTGGTTTNCTTGCATTTTATTTTATTTTTTCACCCGCTCCCTCTCTCCTGCTCAAAGAAAACCCTTGTGCCGTCACTCTCAAACGCACACAACACAGCTCCATACCTCTCTCAGTCACGCAAGGAAAAGCCTCTTCGTCACTCTCTCTCTCTCAAACGCACAGCAAGATTCTTCTTTTTCTCTATGTTGATTTGTTGTGAGCAAGCTATTATTGGCTGCAAAGAGCTGTGGATGATTTGAAGTTATTTGCTCACATCTCAGATAACATGTCTGAGAATCCACTACAGGCCTTGTTTCATAACTTCCAGCAAGTCTCAAATTTTGTTCAACACCATCTCTCTAATTTGATAGGCCTTCATCTGCAGTCATCAGGANCCTCTGGTAGAGGCTCTCTTTTATCTGTCCCTTCCTCCATCAAAGCCCCACTTGCAAAATCTACATCTGTACAACCTGGTGATACTGTCATCAAGGGTAAGTCCACTACCCCAGTGACTAAAGAAGAGCTTGGAAGGGCTACTTGGACTTTCCTNCACACNCTTGCTGCTCAGTATCCAGATAATCCTACAAGACAACAGAAGAAGGATGTAAAAGAACTGGTACAGATATTGTCTCGATTATATCCTTGCAAGGAGTGTGCAGATCACTTTAAAGAAGTTCTTAGAGCAAATCCTGTACAGGCCGGGTCACATGCTGAATTTTCTCAGTGGCTGTGTCATGTTCATAATGTTGTCAATAGAAGCCTTGGCAAGCCAGTATTCCCTTGTGAACGAGTTGATGCAAGGTGGGGAAAACTGGAGTGTGAGCAGAAAGCNTGTGAAATTATTGGAAGTACAACAATTTTTGGGAAGATATAATAGAATTTTAATTAAAAATGATAGCTACATACACTATGCAAGGGGAACGCCTTTTCAAAGGCTTTGAGCTCAAGTTGGCCTAGATGCCAAAGAGAAGGGGAAAAGGTTAATTACCCAAGATACATTAGTTGTACCAAAAGAAGGAAGAATAAAGCTAATCGATCCAAGGTACACTAGTTGTATTGTACCAAAGAGAACCATGTTATGGTTGTTTATTCTAATACGGGTACACAAAGTTGTACTGAGAATGAAAAGTTATGCAAAGATATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00768	36471	43068	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function
GO:0016972 thiol oxidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000768s00019889.1	PF04777.8	Evr1_Alr	82	174	2.20E-29
Glyur000768s00019889.2	PF04777.8	Evr1_Alr	82	174	2.20E-29

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	11.012
SRR1783600	control	10.578
SRR1783602	moderate drought stress	8.582
SRR1811619	moderate drought stress	8.405

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.762
DRR006520	Root Summer glycyrrhizin high producing strain	12.879
DRR006521	Root Winter glycyrrhizin high producing strain	4.791
DRR006522	Root Winter glycyrrhizin high producing strain	4.798
DRR006523	Root Summer glycyrrhizin low producing strain	9.001
DRR006524	Root Summer glycyrrhizin low producing strain	10.573
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.158
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.365

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	13.244
SRR2868004	Drought Stress (root)	10.891
SRR2967015	Control (root)	10.838

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.781
SRR9715740	Leaf	7.822
SRR9715741	Leaf	4.963
SRR9715739	Root	2.530
SRR9715742	Root	4.969
SRR9715743	Root	5.977

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	12.943
SRR8749028	MeJA induced 9h	15.197
SRR8749029	MeJA induced 9h	9.415
SRR8749030	Uninduced	3.318
SRR8749031	Uninduced	0.853
SRR8749032	Uninduced	1.468

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	16.526
SRR8400027	Control - Root	14.859