Gene detail information of Glyur000768s00019887 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G70850.3 | 2.00E-06 | MLP-like protein 34 |
| NR | CAG34224.1 | 6.43E-23 | putative Bet v I family protein [Cicer arietinum] |
| Swissprot | tr|Q93VR4|ML423_ARATH | 3.00E-14 | MLP-like protein 423 |
| trEMBL | tr|Q6KAV9|Q6KAV9_CICAR | 2.00E-23 | Putative Bet v I family protein {ECO:0000313|EMBL:CAG34224.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00768 | 21643 | 29123 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000768s00019887.1 | PF00407.14 | Bet_v_1 | 23 | 82 | 1.40E-14 |
| Glyur000768s00019887.2 | PF00407.14 | Bet_v_1 | 22 | 78 | 8.30E-15 |
| Glyur000768s00019887.3 | PF00407.14 | Bet_v_1 | 17 | 98 | 3.00E-27 |
| Glyur000768s00019887.4 | PF00407.14 | Bet_v_1 | 15 | 96 | 3.30E-27 |
| Glyur000768s00019887.5 | PF00407.14 | Bet_v_1 | 12 | 93 | 2.50E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.789 |
| SRR1783600 | control | 12.355 |
| SRR1783602 | moderate drought stress | 12.934 |
| SRR1811619 | moderate drought stress | 14.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.902 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.296 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.119 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.107 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.322 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.753 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.749 |
| SRR2868004 | Drought Stress (root) | 8.963 |
| SRR2967015 | Control (root) | 16.233 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.011 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 2.078 |
| SRR9715742 | Root | 10.617 |
| SRR9715743 | Root | 10.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.019 |
| SRR8749028 | MeJA induced 9h | 0.009 |
| SRR8749029 | MeJA induced 9h | 0.129 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.079 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.966 |
| SRR8400027 | Control - Root | 54.450 |