Gene detail information of Glyur000767s00028522 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G27340.1 | 4.00E-23 | |
| NR | XP_003600148.1 | 5.32E-32 | hypothetical protein MTR_3g052740 [Medicago truncatula] |
| COG | YP_005029727.1 | 8.00E-15 | conserved protein of unknown function [Azospirillum brasilense Sp245] |
| trEMBL | tr|G7J002|G7J002_MEDTR | 2.00E-32 | DUF971 family protein {ECO:0000313|EMBL:AES70399.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00767 | 48155 | 50049 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000767s00028522.1 | PF06155.7 | DUF971 | 39 | 98 | 5.40E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.091 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.454 |
| SRR1811619 | moderate drought stress | 0.784 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.596 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.354 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.920 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.569 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.567 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.190 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.236 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.246 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.045 |
| SRR2868004 | Drought Stress (root) | 1.549 |
| SRR2967015 | Control (root) | 0.843 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.399 |
| SRR8749028 | MeJA induced 9h | 2.693 |
| SRR8749029 | MeJA induced 9h | 1.375 |
| SRR8749030 | Uninduced | 8.355 |
| SRR8749031 | Uninduced | 4.576 |
| SRR8749032 | Uninduced | 2.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.318 |