Gene detail

Gene detail information of Glyur000765s00033303.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G21240.1	6.00E-89	wall associated kinase 3
NR	KHN15521.1	0	Wall-associated receptor kinase 2 [Glycine soja]
COG	YP_001958461.1	8.00E-08	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q9LMN8\|WAK3_ARATH	5.00E-106	Wall-associated receptor kinase 3 (Precursor)
trEMBL	tr\|I1MAA3\|I1MAA3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA14G25430.1}

Sequence

Transcript Sequence

>Glyur000765s00033303.1
CTCAAAAGCAAGCAAGCAATATCCATATATTGTGTCTTCCAAATAATTAATGCCTATTTTTCTAGTGTTTTTGTGATTGAATTGAAGACAGACAATATGAAAGTGAAGGAGAATATGCACACGACGCAACTGTTGATAATGGTTGCATATTTAGCCCTGCAGTTGGTAGGAGCAGTAGTTGCAGCTGATGATCAAGCAGCCCCTTCTCCGGCACCAGCACCAGCACTACCACCAAAACACCTCCCTGGCTGCCCTTCCGCTTGTGGAGATGTAGAAATCCCTTACCCATTTGGCATTGGCCTTTCATCTACCCCTGGTGATAGTCAAAAACCCTGTTACTTGCATCGCAAATTTAAACTCACTTGCAATGACTCCAAATTATATAGGGATACGGATGGCTTACCAATCTTAGAGATAGACATCCTCAAAGGTGAAATGGTCGTGTCGTTTTTTGTCGCACGGTATTGCGATATTAATACAATTGGCAACACTAGTCCCAGGCTCGGCACTTCGTTGAGCATTTCAAGCAAGGAAAACAAGTTCGTGACTATTGGCTGCGACAGTTATGGTTATCTCAATAGCTTTGTTGACAATCACAGGTATTCAACAGGGTGCATAACACGATGTGATGGCAACGACATAAGTGGGCTCTATAATGGAACGTGTTCAGGTATAGGGTGTTGCCAGGTGGACAATATTCCTCCTAGAATGTGGAATATCAGCGTGAAAGCTAAAACCTTCTCCAGTTCTTCAAAGGAATCTCCGAAAGTGGAAACCTGCACCTATTCCTTCGTTGTCAAGAAAGACAACTACACTTTTTCATCCCGTGATTTAAAACAAGGTTTTCCTCGCCGCAAGACACTCCCCGTGGTTCTTGATTGGACCGTAGGAAACCAACGCTGTACTGCTTCCCAGAATATATCCGACTACGCGTGCAGGAATAATAGCTACTGCGATGACACGGACACGTATTATGGTTACCGGTGCACATGCAATCCAGGTTACGAAGGAAACCCGTACCATCCCGATGGCTGCACTGACATAAATGAATGTGAGAGGGGAAGTCATAGATGCATAAGCAAAGATAACTGTAACAACATCGATGGGAATCACACATGTTTCTGTCCTATAGGGCAATTGGGAGATGGAACAAAGGAAGGAACTAGGTGCTACCGACATAATGTGCCCTTGAATATTGTCATCGGAGCTGGAATAGGAGTTATTGTTCTATTTGTAGGGACTACCTCACTATTCTTGATGCACCAGAAAAGGAAACTCATCAAAATGAGAGAGAAATTCTTTCAACAAAATGGTGGTCCCCTTTTGAAAGAACTACTCTCCAAAAGAAAAGACTCCCCCGCTCAAATATTCACAGAAGATCAACTAAAGAAGGCCACCGACAACTATCATGAGAGCTTATTCCTTGGCAGAGGTGGTTTTGGCACCGTTCACAAAGGATTTCTACCAAATAATACAATCATTGCTGTCAAGAAGCTCAAAATAATTGATGCGAGCCAAATCAAGCAGTTCATTAACGAGGTGGATGTCCTTCTCCATATAAATCATCCAAATGTGGTTAAACTCTTGGGGTGTTGTTTAGAGGCAGAGGTTCCTATGTTGGTTTATGAATTTGTGAGCAATGGTACCCTATTTGAATTTATACACACAAAAGAGGTGAATAATGAAACATGGAAAATTCAGTATATGCTAATGCAAACAAACCAATTGACTGAGAAAAGCGATGTGTATAGCTTTGGGGTAGTGCTTGTGGAGCTGCTAACAGGGGAAAAACCTATTCCCTCTGCTAGGAAAGAAGTGAAAGAGAAAAGCCTTGCTATGCACTTTCTATCTTGCTTAGAAGAGAAACGTGTTTTTGAAGTTATTCAACATGGCATCTTGGATGATGAAAATGAGCAACAGATCGAGGAGGTTGCTAATCTTGCAGGGAAGTGCTTGACACATAAAGGGGAGGAAAGACCTACCATGAAGGAAGTGGTTGTGGAGTTGGACAGAATATGGTTAAAGGAGAAGCATTATTCTTGGATTAATTCAGACATAAATATAGAGGAGCATAATGAAACATTATCGTCTAAAATTTATGAACCTGGTGACAGCAGCAAACATGGATCTGCTGAGTATGACAGCTTGAAAGATGGTGTACAACCAATTGTCTTGGATGATGGAAGATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00765	75387	78065	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.17.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

GO:0030247 polysaccharide binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000765s00033303.1	PF13947.1	GUB_WAK_bind	50	155	9.00E-20
Glyur000765s00033303.1	PF12662.2	cEGF	294	318	1.10E-06
Glyur000765s00033303.1	PF07714.12	Pkinase_Tyr	443	533	2.10E-17
Glyur000765s00033303.1	PF07714.12	Pkinase_Tyr	539	637	4.50E-11

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.530
SRR1783600	control	0.504
SRR1783602	moderate drought stress	1.302
SRR1811619	moderate drought stress	1.269

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.213
DRR006520	Root Summer glycyrrhizin high producing strain	1.219
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	1.431
DRR006524	Root Summer glycyrrhizin low producing strain	1.351
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.070
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.876

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.065
SRR2868004	Drought Stress (root)	0.285
SRR2967015	Control (root)	0.049

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.617
SRR9715740	Leaf	0.525
SRR9715741	Leaf	2.188
SRR9715739	Root	2.003
SRR9715742	Root	16.783
SRR9715743	Root	13.776

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.459
SRR8400027	Control - Root	15.971