Gene detail information of Glyur000763s00023749 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KCW53481.1 | 8.64E-20 | hypothetical protein EUGRSUZ_J02736, partial [Eucalyptus grandis] |
| Swissprot | tr|Q36996|YCF72_ORYSJ | 1.00E-17 | Uncharacterized protein ycf72 |
| trEMBL | tr|A0A059AIL0|A0A059AIL0_EUCGR | 3.00E-20 | Uncharacterized protein {ECO:0000313|EMBL:KCW53481.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00763 | 51561 | 63083 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 72.830 |
| SRR1783600 | control | 75.826 |
| SRR1783602 | moderate drought stress | 57.416 |
| SRR1811619 | moderate drought stress | 60.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 56.853 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 65.501 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 35.370 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 32.118 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 43.752 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 43.513 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 94.754 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 112.385 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.101 |
| SRR2868004 | Drought Stress (root) | 1.124 |
| SRR2967015 | Control (root) | 0.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.811 |
| SRR9715740 | Leaf | 1.678 |
| SRR9715741 | Leaf | 3.367 |
| SRR9715739 | Root | 11.607 |
| SRR9715742 | Root | 0.684 |
| SRR9715743 | Root | 1.373 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.180 |
| SRR8749028 | MeJA induced 9h | 0.376 |
| SRR8749029 | MeJA induced 9h | 0.390 |
| SRR8749030 | Uninduced | 0.641 |
| SRR8749031 | Uninduced | 0.219 |
| SRR8749032 | Uninduced | 0.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.070 |
| SRR8400027 | Control - Root | 0.111 |